Miscanthus floridulus: 136506676
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Entry
136506676 CDS
T10264
Name
(RefSeq) TATA-box-binding protein 2-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136506676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136506676
03021 Transcription machinery [BR:
mflo03021
]
136506676
Transcription factors [BR:
mflo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
136506676
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136506676
RNA polymerase III system
TFIIIB
136506676
RNA polymerase I system
SL1/TIF-1B
136506676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
136506676
NCBI-ProteinID:
XP_066357668
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All DBs
Position
15:81769237..81773017
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AA seq
200 aa
AA seq
DB search
MAELALEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLREFRKVQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggcgttggaggggagccagccggtggatctctccaagcacccctccggc
atcgtccccacgctccagaatattgtgtcgacggtcaatttggactgtaaactggacctc
aaagcaattgcccttcaagcacgtaatgcagaatataaccccaagcgttttgctgcggtt
attatgcggataagagaaccaaaaactacagcgttgatatttgcgtcagggaagatggtc
tgtactggagcaaaaagtgaacaacaatctaaacttgcagctaggaagtatgctcgcatc
atccagaagcttggttttccagcaaaattcaaggacttcaagattcagaacattgttggg
tcttgtgatgtcaaattcccgatcagacttgagggtcttgcatactctcatggtgctttc
tcaagttacgaaccagagctcttccctggcttgatctatcggatgaagcagccaaagatt
gtgctgctgatttttgtttcgggcaagattgttctgacaggagctaaggtgagagaggag
acgtacactgccttcgaaaatatttatcctgtcctcagagagttcagaaaagtccagcaa
tga
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