Miscanthus floridulus: 136506684
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Entry
136506684 CDS
T10264
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136506684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136506684
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
136506684
Complex C
U5 SnRNP specific factors
136506684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_16
TPR_2
PMC2NT
Motif
Other DBs
NCBI-GeneID:
136506684
NCBI-ProteinID:
XP_066357675
LinkDB
All DBs
Position
15:60067877..60073884
Genome browser
AA seq
959 aa
AA seq
DB search
MSGTTPTPTPTPTPPAPLPPPPAARPARYDFLNSKPPPNYVAGLGRGATGFTTRSDIGPA
RAAPDLPDRSAAAAGPAVGRGRGKPTGEDDGDDGGGDEEKGYDENQTFDEFEGNDAGLFS
NADYDDDDREADAVWESIDQRMDSRRKDRREARLKQEIEKYRASNPKITEQFADLKRKLA
DLSAQEWESIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKSRAAGGTE
TPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEIS
DIKKARLLLKSVTQTNPKHPPGWIAAARLEEIAGKLQVARQLIQRGCEECPKNEDVWLEA
CRLASPDEAKAVIARGVMSIPNSVKLWLQAAKLESSDLNKSRVLRKGLEHIPDSVRLWKA
VVELANEEDARLLLHRAVECCPLHVELWLALARLETYDQARKVLNKAREKLPKEPAIWIT
AAKLEEANGNAQSVNKVIERGIRSLQREGMDIDREAWLKEAEAAERAGSVLTCQSIVKNT
IGIGVDDEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQLEKSHGT
RESLDALLKKAVNYNPRAEVLWLMAAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAF
KLEFENNEPERARMLLAKARERGGTERVWMKSAIVERELGNVGEERRLLEEGLKLFPAFF
KLWLMLGQMEDRLGNGAKAKDVFENGLKHCPSCIPLWLSLASLEEKISGLSKSRAVLTMA
RKKNPATPELWLAAIRAELRNGNKKEADALLAKALQECPTSGILWAAAIEMAPRPQRKGK
STDAIKRSDHDPRVIATVAKLFWLDRKVDKARSWLNRAVTLAPDIGDFWAFYYKFELQHG
TVDTQKDVLKRCVAAEPKHGEKWQAISKAVENSHLPVEALLKKAVVVVDVEENANPAGA
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaccaccccgacccctacccctacacccacaccaccagccccgctcccgccg
ccgccggccgctcgccccgcgcggtacgacttcctcaactccaagccgccgcccaactac
gtcgcggggctcggccgtggcgcgaccggcttcaccacccgctcggacatcgggccggcc
cgcgccgcgcccgacctccccgaccgctccgccgccgccgcgggccccgccgtcggccgc
ggccgcgggaagccgaccggcgaggatgacggcgacgacggcggcggcgacgaggagaag
ggctacgacgagaaccagacgttcgacgagttcgagggcaacgacgccggcctcttctct
aacgccgactacgacgacgacgaccgcgaggcggacgccgtgtgggagagcatcgaccag
aggatggactcgcgccgcaaggaccgccgcgaggcgcgcctcaagcaggagatcgagaag
taccgcgcgtccaaccctaagatcaccgagcagttcgctgatctcaagcggaagctcgcc
gatctgtccgcgcaggagtgggagagcataccggagattggggactactcgctgcgcaac
aagaagaagcggtttgagagcttcgtgcccgtgccggacaccctgcttgagaaggcccgg
caggagcaggagcatgtcacggcgcttgaccctaagagccgtgcggctggtggcacagag
acgccatgggcgcagactcctgttaccgatctcacagctgtgggcgagggtcgtggcacc
gtgctctcgctcaagttggataggttgtcagattcagtttctgggctcactgtagttgat
cccaaagggtatttgacagacctgaaaagtatgaagattactagtgatgctgagatttct
gacatcaagaaggcgcgactgttgctcaagtcggtgacacagacaaaccctaagcaccca
cccggttggattgctgctgctaggctcgaagagattgctggcaagcttcaggttgctcgg
cagctcatccagcgtggctgcgaggagtgccccaagaacgaagatgtttggctggaggcg
tgccgtttggccagtccagatgaagcaaaggctgtaattgcccgtggtgtgatgtcgatt
ccaaattctgtgaagctatggttgcaggcagcaaaattggagagtagtgatctgaataag
agcagggttttgaggaaagggctggagcacattcctgactcagtccggctatggaaggct
gtagttgagcttgcaaatgaggaggatgcaaggctgttgcttcacagggctgtcgagtgt
tgcccgttgcatgttgagctttggcttgcccttgcgaggctggagacctatgaccaagca
aggaaagtacttaacaaggcgagggagaagctacccaaggagcctgccatttggattaca
gctgcgaagctagaggaggctaatgggaatgcacaatcagttaacaaggtgattgagaga
ggtatcagatctctacagagagaaggaatggatattgatagggaagcatggttaaaggaa
gcagaagctgcggagcgtgctggatctgttttgacttgccagagtattgtgaagaacact
ataggcattggtgttgatgatgaggatcggaagcgtacatgggttgctgatgctgaggaa
tgcaagaagcgtggttcaatagaaacagcgcgtgccatctatgcacatgcgcttactgtg
ttccttactaagaagagtatttggctgaaagcagctcagcttgagaagagccacgggact
agggagtcacttgatgcgctcctcaaaaaggctgttaactacaatccacgagctgaagta
ttatggcttatggctgcaaaggagaaatggttggctggggatgtgcctgctgctcgtgcc
attcttcaggaagcttatgctgctatccccaattcagaagagatctggctggctgctttc
aagctcgagtttgagaacaatgagccagagagagcaagaatgctcttggccaaggccagg
gaaagaggagggacagagagggtttggatgaaatctgccattgttgagagggaattgggg
aatgttggcgaggaaaggagattgttggaggaaggtttgaagctattccctgcattcttc
aaattgtggttaatgcttggacagatggaggaccggcttggtaatggagcaaaggccaag
gatgtttttgagaatggcctgaaacactgccccagttgtatccctctttggctctctcta
gctagcctagaggagaagattagtggcttgagtaaatcacgtgctgtcctcacaatggct
agaaagaagaaccccgctacacctgaactctggcttgcggcaattcgagctgaattgagg
aatgggaacaaaaaggaagccgatgctctactggccaaggcattacaagagtgtccaaca
agtggtattttgtgggctgcagctattgagatggcaccacgcccacagcgcaaaggaaag
agtacagatgctattaagcgaagtgatcatgatccacgtgtcattgcaactgtggcgaaa
ctgttctggcttgacaggaaggttgataaagctaggagttggttgaacagggctgttact
cttgctcctgatattggtgatttttgggcattttactacaaatttgaacttcagcatgga
actgtggacacacaaaaggatgttctgaaaagatgtgttgcagcagaaccaaagcatggt
gaaaaatggcaagcaatatccaaggctgttgaaaactcacacctgcctgtagaggctctt
ctaaagaaagctgttgtggtggttgatgtagaagaaaatgccaatccggcaggagcgtag
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