Miscanthus floridulus: 136506758
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Entry
136506758 CDS
T10264
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136506758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136506758
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
136506758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
A2L_zn_ribbon
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
136506758
NCBI-ProteinID:
XP_066357745
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All DBs
Position
1:complement(190820487..190826904)
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AA seq
946 aa
AA seq
DB search
MRSKWMGRMGSAGQKRHTSSPGIQSQSNIFLNNKRLRLQFLQQVNELKAGSVTKDLKAIT
AKRRELFGIIERLRQVPIEQLYSSPLPKASDSRLDNFGKIGSSYSPDNVIDLDADEDNVE
YHTQVNAGNTEAGSTAAVDSVDKDRVKSFGDENSSSNQNGNYIQQNPLLEHPVGHQEIIR
PDNCNSSTEPQALVKQVNDGMDNDDVSAEAKKIVLFDSHSTSEQQPLMKRARGNINTNTE
NGLKEKGKIGRTIAKHVGSYEVSCEILQNEPQSNEGNHHDNGSPVDELDDLWMGMSVALA
CSEQTNQVNLSIVPFESNSEETEDACNHDFLLKDDLGMVCRICGLIQQRIDKIFEHSWKK
RNQAYRTYPIKQRNSSDPDATMNALGTILSVAPDTLSMHPQHSEQMKPHQVEGFNFLIKN
LADEDNPGGCILAHAPGSGKTFLLISFVHSFLARYPAGRPLIMLPKGILGTWKSEFLRWQ
VENIPLYDFYSSKASSRPEQLKVLKLWEESKSILLLGYQQFAHIISDNSSDRETIMCKEK
LLRVPSLVILDEGHTSRNDQTDLLNALETIRTPRKVVLSGTLFQNHVGEVFNILNLVRPR
FLKMQRSRAIMKSILTKVDMSGMAMRSKTISEKVFYELIEENLQKDSKTMMVMIIQNLRK
LTENILHYYQGEILKELPGLVDFTVLLNMSSKQEDIIKGLAGLKRFEAHAKCNAVSLHPC
LKDVKIVDKKNRNISKRMMDSIVCGIDISDGVKAKFIHNLLSLSEAAGEKVLVFSQYVRS
LHFLETLFIKMKGWKPGVNTFLMDGSSTQEQREQAIGRFNNSPEAKVFFGSIKACGEGIS
LVGASRIVILDVHENPAVMRQAIGRVFRPGQSRVVYCYRLVASGSSEEEDHHTAFKKERV
SKLWFEWDELSSNEDFELAKVDVSDCKDMFLESPALQEDIKSLFKR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcaaaatggatgggaaggatgggttctgctggccagaaaaggcacactagctca
ccagggatccagtcccagtcaaacatcttccttaataataaacgtcttcgtcttcagttt
cttcagcaagtcaatgagttgaaggctgggagtgtcaccaaagatctcaaggcaatcact
gccaaacggcgtgaactttttggcatcatagaaaggctacgacaagtacctatcgaacag
ctttattccagcccactgccgaaagcatcagattcaagactagataactttggaaaaatt
gggagcagttatagtccagataatgttattgacttggatgcagacgaagacaatgttgaa
tatcacacccaagttaatgcaggcaacactgaggctggttcaacagcagcagttgattca
gtcgacaaggacagggttaaatcctttggtgatgagaattcatcttctaatcaaaatggt
aattacatccaacagaacccgctgcttgagcaccctgtcggacatcaggaaatcatcagg
ccggacaattgcaatagcagtactgaaccacaggctttagttaagcaagtgaacgacggc
atggacaatgacgatgtttctgctgaggccaaaaagattgttctatttgacagccacagt
acttctgagcagcagccattgatgaagcgagcacgtggaaacataaacactaatactgag
aatggtcttaaagagaaaggaaagattggaagaaccatagcgaaacatgttggttcttac
gaagtatcttgtgaaattctacaaaatgaaccacagagcaacgagggtaatcaccatgat
aatggtagcccggttgatgagctggatgatctgtggatgggcatgtcagttgcacttgca
tgttcagagcagaccaatcaagttaatctgagtatagttccatttgagagtaactctgag
gaaacagaggatgcatgtaaccatgacttcctgttgaaagatgatttgggcatggtgtgc
cgtatttgtggtctgatccagcagcgcatcgataaaatttttgagcattcatggaaaaag
cgcaatcaagcgtacagaacgtacccaataaaacaaagaaactctagtgatccagatgca
actatgaatgctctaggaactattttaagtgttgcccctgatactctgtcaatgcaccct
caacattcagaacagatgaaacctcaccaagtggagggtttcaatttcttgattaagaat
ctggcagatgaggacaacccaggagggtgtattctagcacatgcgcctggttctggaaag
acatttctgctgattagttttgtccacagctttctggccaggtaccctgctgggagacca
ttgattatgcttccaaagggtatactgggaacatggaaaagtgaatttctccgttggcaa
gttgagaacattcctttgtatgatttttactcctccaaagctagtagccgacctgagcag
ctgaaagttttgaaattgtgggaagaaagcaaaagcatattgctgcttggctatcaacaa
tttgcacatataatttctgacaactcttctgatagagaaaccataatgtgcaaagagaag
ctgctgagagtcccaagccttgtaattctagatgaaggccacacctcgagaaacgaccaa
acagacctgctcaatgcacttgaaactattcgaactcctcgaaaagtggtgctctcaggg
accctgtttcagaaccacgtaggtgaggttttcaatattttgaatcttgtgcgacccaga
ttcttgaagatgcagagatcacgtgcaatcatgaagagtatactgactaaggtggacatg
tcagggatggctatgcgatcgaaaaccatatcagaaaaggttttctatgaattgattgag
gagaatcttcagaaggattccaaaactatgatggtgatgattatccagaatctacgcaag
ctaactgaaaatattctccactactaccaaggtgagatcttgaaggagctacctggactt
gtggatttcacagttttgctaaatatgagtagcaaacaggaagatatcatcaagggtttg
gcaggactgaaaagatttgaagcacatgcaaaatgcaatgctgtttcacttcatccatgc
ttaaaggatgtcaagattgttgacaagaaaaatagaaacatcagcaaaaggatgatggat
tcaattgtatgtggaattgatatcagtgatggggtgaaggcaaagttcatacacaatctg
ttgtcactttcagaagctgcaggagagaaggtacttgtgttcagccagtatgttcgctct
cttcatttcttggaaacgttgttcatcaaaatgaaaggatggaagccaggagttaacact
ttcctgatggatggcagttcaactcaagagcagcgagagcaagcaattgggaggtttaac
aactcacctgaagctaaagtcttctttggttccatcaaggcttgcggggaggggatctcc
ctcgttggtgcatcccgcattgttattttggatgttcatgagaatcctgctgtgatgcgc
caggcaatcggacgggtattcagaccggggcagtccagagttgtgtactgttaccgcctc
gttgcttctggctcatcagaggaggaggatcaccacaccgccttcaagaaagagcgagtg
tcaaagctgtggttcgagtgggatgagctcagcagcaacgaggattttgagctggccaag
gttgatgtttcagactgcaaggacatgtttcttgaaagccctgcactacaagaagacatc
aaatccctatttaagaggtga
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