Miscanthus floridulus: 136506795
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Entry
136506795 CDS
T10264
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136506795
03460 Fanconi anemia pathway
136506795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136506795
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136506795
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
136506795
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Topoisomerases
136506795
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
136506795
FA (Fanconi anemia) pathway
136506795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
136506795
NCBI-ProteinID:
XP_066357791
LinkDB
All DBs
Position
1:190939046..190948496
Genome browser
AA seq
918 aa
AA seq
DB search
MQPGGGGAIRVLNVAEKPSVAKAVAEILSRRSMQSRAGRSQYNRIFEFNYAINGRACHML
VTSVTGHLMELEFDDRFRRWHSCDPAELFQAPVRKSVPQDKQAIKQTLEEEARRCQWLVL
WLDCDREGENIAYEVIDVCTSANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAVD
ARQEIDLRIGASFTRFQTMLLKDAFVINVTGDDRNLVLSYGPCQFPTLGFIVERFWEIQA
HEPEEFWTINCTHTSDEGTASFGWIRGHLFDYSCAISIYEMCVSEPMATVQNVRNQEKLK
YPPYPLSTVELQKRASRYFRMSSERTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIAR
EQVNHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEGERNWSPDHTRLYE
LVVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFDSWGGTLLPTYN
IGQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDE
NTRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSMGTKSKSEVLQSCLQQMKA
CFLDARVNKAKLLDAMGTFFARSNRPINETQNPVEVVRPCGACNGSEMVLKRRATGEFMV
GCRSYPQCRNVVWLPGSLSEAAVTNQVCPICAPGPVYKIQFKFRRRDIPPNFDVDHLAVF
LIGCVGGCDDILRELMELSRFGGRSQAATPARGPTPNGVGQGGPRQDLHTNFRPAGQLNN
ENPSVMHSQGFRSTHTQNPSSASVAGQVLCTSCGAACILLVANTEANRGRKFYKCQDPGC
GFFKWEDELDNGTGRGRRGRGSSRQASASAGRRGGGRRGRGRNADGGMFVSATGDTVPGS
CFNCGDPSHFANACPNRR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccggcggcggcggcgcgatccgcgtgctgaacgtggcggagaagccgtcggtg
gcgaaggccgtggcggagatcctgtcgcgccgctcaatgcagtcgcgggcgggccggtcc
cagtacaaccgcatcttcgagttcaactacgccatcaacggccgcgcctgccacatgctc
gtcacctccgtcacgggccacctcatggagctcgaatttgatgaccgattccgccgctgg
cactcctgcgaccccgcagaactcttccaggcccccgtccgcaagtccgtgccccaggac
aagcaggccataaaacagactttggaagaagaagctaggagatgccagtggctggtgcta
tggcttgattgtgatagagagggtgagaacatagcatatgaagtgatcgatgtttgtaca
agtgccaacagtcatcttaacatttggagggctcgcttctcagctttgattgacagggaa
atacatgaatctgtgcaacatcttggtaggcccaacaagctctttgcagatgctgtggat
gcaagacaggaaattgaccttcgcattggtgcctccttcacaaggtttcaaacaatgctg
ttaaaagatgcatttgtaattaatgtgactggggatgacaggaatttagttctgagctat
ggtccttgtcagtttccaaccctaggattcattgttgagcgtttctgggagattcaagct
catgaacctgaagagttctggacgataaattgtactcatacttcagatgaaggcactgca
tcttttggttggatacgtggtcatttgtttgattattcatgtgctattagtatctatgaa
atgtgtgtttcagaaccaatggcaacagtacaaaatgttaggaatcaagagaaactaaaa
taccccccatatccactaagtacagtggagcttcagaaacgtgcttctaggtactttaga
atgagttcagagcgcacaatgaaggtggctgaagagctttatcaagctggattcattagt
tatccgaggacagaaactgataacttctccccaaacactgacctgcatgcaattgcacgt
gaacaagtgaatcatccagtttggggagcatatgctcagcgacttctaaatcctgaagca
agactttggagaaatcccagtaacggtggtcatgatgacaaagcacatcctcctattcat
ccaaccaagttttcagaaggtgaaagaaactggagcccagaccacactagattgtatgag
cttgttgtccgacatttccttgcatgctgctctcaaccggctgttggagctgaaacaact
gtggaaattgacatagccggtgaacagtttaatgcatcagggcgtgttatacttgctaaa
aattatctggatgtttatcgctttgactcatggggtggaacattacttccaacatacaac
attgggcagcagtttgttccgacaactttaacacttgattctggagtgactcggccaccc
cctcttcttgctgaagctgaccttcttagctgtatggataaagcaggaattggcactgat
gcaaccatgcatgatcacataaagaagttgcttgaccgttgttatgcaaccaaagatgaa
aacacacgtttctccccgacaaatcttggtgaggcattggtgatgggttatgatgaaatg
gggtatgagctctggaagccttatttaagatcaatgatggaagctgatatgaaatcagtt
agcatgggtactaagagtaaatcagaagtactccagagttgtttgcagcagatgaaggcc
tgttttcttgatgcaagggtgaacaaagcaaaactccttgatgcaatggggacattcttt
gcaaggtctaatagacctataaatgaaactcaaaatccggtagaggttgtgaggccttgt
ggtgcatgcaatggatctgaaatggtgcttaagcgaagggcgactggtgaatttatggtt
gggtgccgaagttatccacaatgtagaaacgtggtatggctcccaggatctctttcagaa
gcggctgtaactaatcaagtttgtcctatctgtgcaccaggccctgtttataagattcaa
ttcaagttccgtcgtagggatattccaccaaatttcgatgttgatcacctagccgttttt
ttgataggttgtgttggtggatgcgatgatatcctcagagagcttatggagctaagtagg
tttggaggtcgtagccaggctgcaacaccagcaagaggaccaactccaaatggtgtgggt
caggggggtccaaggcaggatttacatacaaattttcgtccggcaggccagcttaataat
gagaacccatccgttatgcattctcaaggtttccgttcaacccatacccaaaatccaagt
agtgcttcagttgcaggtcaagtgctgtgcacttcatgtggagcggcttgcatattacta
gttgctaatacagaggctaacagggggaggaagttctacaaatgtcaagatcctggctgt
ggcttcttcaaatgggaagacgaattggacaatggtacggggagaggccgccgcgggcgc
ggtagcagcaggcaggcgtctgcatctgcaggacggagaggcggaggccggaggggcaga
ggccgtaacgctgacggcgggatgttcgtttcagcgacgggcgacaccgtgcccggcagc
tgctttaactgcggcgatccttcccactttgccaacgcctgcccgaaccggagatag
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