Miscanthus floridulus: 136506817
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Entry
136506817 CDS
T10264
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00061
Fatty acid biosynthesis
mflo00071
Fatty acid degradation
mflo01100
Metabolic pathways
mflo01212
Fatty acid metabolism
mflo04146
Peroxisome
Module
mflo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
136506817
00071 Fatty acid degradation
136506817
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136506817
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mflo01004
]
136506817
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136506817
Enzymes [BR:
mflo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
136506817
Lipid biosynthesis proteins [BR:
mflo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
136506817
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of breast milk
136506817
Exosomal proteins of breast cancer cells
136506817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Motif
Other DBs
NCBI-GeneID:
136506817
NCBI-ProteinID:
XP_066357821
LinkDB
All DBs
Position
15:complement(19944314..19955107)
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AA seq
700 aa
AA seq
DB search
MEDAAHSQRRRVGAATAHLQRPPPPPAGGCGGLAVNPTAAEYVHAQGYSVVLPEKLQTGK
WNVYRSARSPLRLISRYPDTPDIGTLHDNFTYAVETFTDCKYLGTRIRTDGTIGDYKWMT
YGEASTSRTAIGSGLIYHGVREGACIGLYFINRPEWVIVDHACSAYSYVSVPLYDTLGPD
AVQFIVNHAAVEVIFCVPQTLSILLSFIAQMPCVRLIVVVGGDDANMPSTPVTTGVEIIT
YSRLLIQGKASPQHFRPPKPEDVATICYTSGTTGTPKGVVLSHENLIANVAGSSLNIKFY
PSDVYISYLPLAHIYERVNQIAALHCGVAIGFYQGDNLKLMDDLAALRPTIFTSVPRLYN
RIYTAITNAVKESGGLKEKLFHTAYNAKRQAILKGKNPSPVWDKLVFNKIKARLGGRVRL
MSSGASPLAADVMEFLRICFGGEVLEGYGMTETSCIISAMDVGDRSIGHVGSPIASCEVK
LVDVPEMNYTSDDQPYPRGEICVRGPIIFHGYYKDEVQTKEVIDEDGWLHTGDIGLWLPG
GRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSLNSSLVGIIAVEPEV
LKAWAASEGIQCEDLRQLCADPRARAAVLADMDSVGKEAQLRGFEFAKAVRLVAEPFTVE
NGLLTPTFKVKRPQAKTYFAKEISDMYAELREAEAPRSKL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccgcccactcccagcgccgccgcgtcggcgcggccaccgcccacctccag
cgcccgccgccgccgcccgccgggggctgcggcggcctcgccgtcaaccccaccgccgcc
gagtacgtccacgcgcagggctacagtgttgttctccctgagaaattgcaaaccggcaag
tggaatgtgtaccggtccgcgcgttcacctctaaggctgataagtagatatcccgacacc
ccagacattggaacgctgcatgataatttcacgtatgcagttgagacttttacagactgt
aaatacctgggaacaagaatcagaactgatgggacaattggagactacaaatggatgaca
tacggagaagctagcacgagcaggactgcaataggttctggtcttatctatcatggagtt
cgtgaaggtgcatgcattggtctgtattttataaacagacccgagtgggttatagttgac
catgcttgttctgcatattcatatgtatctgtgccactttatgacactctcggcccagat
gctgttcaattcatcgtgaaccatgcagcggtggaagtaatattctgtgtgcctcaaact
ctgagcattctgttaagttttatagctcaaatgccatgtgttcggcttatagtggtagtt
ggtggagatgatgcaaatatgccatcaacgccagttactactggagtggaaatcataact
tactccaggctgctcatccagggaaaggccagtcctcaacattttcgcccgccaaaacct
gaagatgttgccactatctgttacactagtggcactactggcacgccaaagggagttgtt
ctttctcatgagaacttaattgcaaatgtagcaggatcaagcctgaacattaagttttac
ccctccgatgtgtatatctcatatctacctttggctcacatctatgagagggttaaccag
attgcagcactgcactgtggtgttgccattggattctaccaaggggataatttgaagctc
atggatgatctggctgctttgagaccgacaatattcacaagtgtcccccggttatataac
agaatttatactgcaattacaaatgccgtgaaggagtctggtgggctgaaagaaaaattg
tttcatactgcatacaatgccaagagacaagcaatccttaaagggaaaaatccatcccca
gtgtgggataagttggtatttaacaaaataaaagctaggcttggtggacgagtgagactt
atgagttcaggtgcttctccactggcagcagatgtcatggaattcctgaggatatgcttt
ggtggtgaagttcttgaaggctatggaatgacagagacatcctgtatcatatctgcaatg
gatgttggtgacagatcaattggtcatgttggatccccaattgcatcttgtgaggtgaaa
cttgtggatgtcccagaaatgaattatacgtccgacgatcaaccttatcctcgtggagaa
atttgtgttagaggacctataatattccatggttactataaagatgaagttcaaacaaaa
gaagtcattgacgaagatggttggttgcacactggagacataggtctgtggctacctgga
gggcgtttaaagattattgataggaaaaagaacattttcaagttagctcaaggagaatac
atagctccagagaagattgaaaatgtttatgccaaatgcaagttcattgcccaatgtttt
atatatggtgatagtttaaactcttccttagttggtattattgcagttgaaccagaggtt
ttgaaggcttgggctgcatctgaagggatccagtgcgaagacttgagacagctttgtgct
gaccccagagcaagagctgctgtcctggctgatatggattctgttgggaaggaagcgcag
ctaagaggttttgaatttgctaaagctgttcggcttgttgctgagccattcacagtggag
aatggtctcctcaccccaacattcaaggtcaaaagaccgcaagctaagacatactttgca
aaggaaatctcagatatgtatgcagagttgcgggaggcggaggcacccaggtcgaagttg
tga
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