Miscanthus floridulus: 136506958
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Entry
136506958 CDS
T10264
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00040
Pentose and glucuronate interconversions
mflo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
136506958
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
136506958
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Tsr0524-like
Motif
Other DBs
NCBI-GeneID:
136506958
NCBI-ProteinID:
XP_066357930
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Position
15:9443290..9445144
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AA seq
409 aa
AA seq
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MAFLMLCFTSFLHLPIASPLPIDAATASGQDPEQVVQDVVRSVNMPSLHRRRMVGECGSG
NPVDDCWRCDPSWADNRQRLADCVVGFGRAAIGGKNGKTYVVTDPSDDADPASPAPGTLR
YGVIQQEPLWITFARDMTIRPKQDLLVASYKTVDGRGAGVVVRDGGACFVLRNVSNVIIH
GLTIRGCKPAPALSPSAESEGDGITVFRATNVWVDHCTLEACVDGLIDVTDGSTNVTLSN
NVLRNHNKTMLLGHSDDFTDDKNMKVTVAFNRFGPGLVQRMPRCMHDQEAMHFIFLIINN
DYIKWEMYAIGGSASPTILSHGNRFLAAGCLNCENFLQVTKREVAPKSEWTWISESDTIL
NGAFFTSSGTPTPDVKAPSLLAFAKAASFVPAITASVGVLSCKEALVSR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctcatgttatgtttcacatcctttttgcacctgcccatcgcttctccattg
ccaatcgacgccgcgacggcatctgggcaagaccctgaacaggtcgttcaagatgtagtc
agaagcgtgaacatgccgtcgctgcaccgacggcggatggtaggcgaatgcggcagcggc
aatccagtggacgactgctggcgctgcgaccccagctgggccgacaaccggcagcgcctc
gcggactgcgtggtcggcttcggccgcgccgccatcggcggcaagaacggcaagacctac
gtggtgaccgacccgagcgacgacgctgacccggcgagcccggcgccgggcacgctccgc
tacggcgtcatccagcaggagccgctgtggatcacgttcgcgcgcgacatgaccatcagg
ccgaagcaggacctgctcgttgcctcctacaagaccgtcgacggccgcggggccggcgtg
gtggtccgcgacggcggcgcctgcttcgtgctgcgcaacgtgagcaacgtcatcatccac
gggctcaccatacgcggctgcaagcctgcgcctgcattgtcgccgtcggcggagtcggag
ggtgacggcatcaccgtgttccgcgccaccaacgtgtgggtcgatcactgcacgctcgag
gcctgcgtcgacggcctcatcgacgtcacggacggctccacgaacgtgaccctgtccaac
aacgttctcaggaaccataacaagacgatgctgcttggccacagcgacgatttcactgat
gacaagaacatgaaggtcactgttgcgtttaaccgtttcggaccaggtcttgtacagaga
atgccaaggtgcatgcatgatcaagaagccatgcattttatttttctaatcatcaacaac
gactacataaaatgggagatgtatgccattggtggcagtgcttcaccgacaattctgagc
catggcaatcgattccttgccgctggttgtctgaactgtgaaaattttcttcaggtgacc
aagcgtgaggtagcaccaaagagtgagtggacctggatatctgaaagtgatacgatactc
aacggcgcattcttcacatcatctggtactcctacacctgacgttaaggcccctagctta
ctggcttttgccaaggcggcctcttttgtgccggcgatcacggcctctgtaggggttctg
tcatgcaaggaggccttagtaagcagatga
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