Miscanthus floridulus: 136507074
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Entry
136507074 CDS
T10264
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136507074
03036 Chromosome and associated proteins [BR:
mflo03036
]
136507074
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
136507074
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136507074
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
136507074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
UvrD-helicase
ResIII
AAA_22
UvrD_C
Mov-10_helical
AAA_16
AAA
Terminase_6N
ATPase_2
Mg_chelatase
UvrD_C_2
SLFN-g3_helicase
AAA_7
Helicase_RecD
Terminase_3
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
136507074
NCBI-ProteinID:
XP_066358013
LinkDB
All DBs
Position
1:complement(191742859..191748151)
Genome browser
AA seq
968 aa
AA seq
DB search
MGTHRRNYSDDEFSVAGEKPEVEFMDFQNDDAFQDYSSEDAPVLVSAPFPFKDGKLKSVL
VGETSSDTIQIENTSPESVNLWSVRIFASNPEDSYVLSMMRPPSNDANEEEKQAFLALTS
VEDRTLLPGQTLTVWLSCMPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSKALFSDKP
YSRRRGQVKKFEPSPYVPGCRPTQQHTQGFKHKLRQYAIPAHIRELIESKQKPDVLYDEL
SMKNYAEFFSALIVMEELNMEEEMRTYDMEGVLMRRRGMNFLSLEVPGLAEKRPSLVQGD
FIVARYAGNDARPYQGFLHKVEADEIFLQFDHQFHMNHRDRNQYHVSFTYNRVSMRRLYK
SIDDAKHLGPGILFPRQSPYRVLKRWPFKPLNPHINTEQADAVAMILACRGVPPYVVYGP
PGTGKTMTIVEAILQLYTGKKRANILICAASNTAADHVLEKLLQASYLICPSDIFRLNAQ
SRQYEDVNTDFIKFCFFQDRMFKCPPLKALVQYRIVISTYTSSYLLQAEGIRQGHFTHIF
LDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPKQLGPVVYCKQAEKDGLGRSYLERLLTD
FEQYQTGNPNYVTKLVRNYRCHPAILELPSELFYEGELIACKERESSAYDCIGLPNKSFP
ILFVGIQGCDEREGTNPSWFNRIEVSKVVSIIRNLTRGGDVHESDIGVITPYRQQVAKIK
KALETFEIPDLKVGSVEQFQGQEREVIIISTVRSTVKHNEFDKNFNLGFLSNHKRFNVAI
TRAKSLLIIIGNPYIITKDRHWDRLLRYCADNDSYQGCPLPPPESHSYSDDTGFFSKYDE
DQGGPSGQDYNQEAAYCNCNQEAAYCNYNQEPSDFGLRHDTGAQPASENQVLWSEELPED
ENQPLSNPQADLEEMPKQDVEEGAAQGDAQADQLSTNDNQLQDASTVKYTFPPGWCDVSS
IPATGWGD
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggggactcatcgtaggaattattcagacgatgaattttcagttgctggcgagaagcct
gaagtagaattcatggacttccagaatgatgacgcttttcaggattattcatctgaagat
gcccctgtgcttgtctcagctcctttccctttcaaggatggaaaactaaaatctgtactt
gttggagaaacatcgtctgataccattcagattgagaatacctctcctgaatctgtaaat
ttgtggagtgtaagaattttcgcttcgaacccagaagacagctatgtgttatcaatgatg
agacccccgtcaaatgatgcaaatgaggaggaaaagcaggcttttcttgctttgacatcc
gtggaagaccgtacacttctgcctggacaaacacttacagtttggctgtcttgtatgcca
aaagatattggtttgcatacatcaatcgtgcatgttgatatcggtgatgagaagattgag
cgtgtggcttttcttttggcagatgacaatgtctccaaggccttattttctgataagcct
tattccaggagacgtggtcaagttaagaaatttgagccttcaccatatgtgccaggttgc
cgtccaactcagcagcacactcaaggattcaaacataagcttcgtcagtatgcaatacct
gcacacatccgcgagcttattgaaagtaaacagaaacctgatgtcctatatgatgagttg
agcatgaagaactatgcagaattttttagcgctcttatagtcatggaagaactcaatatg
gaggaggagatgagaacatatgacatggagggtgtcttaatgagacggaggggtatgaac
tttttgtctcttgaggtccctggtttggcagaaaaaaggccatcactagtccaaggagac
ttcatagttgctagatatgctgggaatgatgctcggccttaccaaggtttccttcataag
gttgaagctgatgagatatttttacaatttgaccatcagttccacatgaatcaccgtgac
agaaaccagtaccacgttagcttcacatataacagagtgagcatgagaaggctttacaaa
tcgattgatgatgcaaaacatttgggacctggcattttgtttccccgccaatcaccttat
agagttttgaaaaggtggccatttaagcctctgaatccacatataaatactgagcaagca
gatgctgttgcaatgatacttgcctgcagaggagttccaccatatgtggtatatggacct
ccaggaactggcaagaccatgaccattgtagaggccattttgcagctttatacgggcaag
aagagggcaaatattctcatttgtgctgcttccaatactgcagctgatcatgtactggaa
aagctccttcaagctagctatctgatctgtccgagtgatatctttaggctaaatgctcag
agccgtcaatacgaggatgtcaatactgattttatcaagttttgcttctttcaagatcgg
atgttcaagtgccctccgttaaaagcattggtgcagtacaggatagttatatcgacctat
acgagttcatatctgctgcaggctgagggcattcgccaagggcatttcacacacattttc
ttggatgaggctggtcaagcctctgaaccagaggcgatggttcctttgtcagggttgtgt
ggaagagacactgtggttgtgttagcaggagatccaaagcaattagggccggtggtttat
tgtaagcaagcagagaaggatggtcttgggagatcatatcttgaaaggctgcttactgac
ttcgagcagtaccaaacagggaatcctaattatgtgaccaagctggtgaggaattatcgg
tgccatcctgcaatcctagagctaccatcagagcttttctatgagggtgaattgattgcc
tgtaaagaaagagaatcatctgcttatgattgcattggccttcctaacaagtccttccct
attctttttgtcggaattcaaggatgcgatgagagggaaggcaccaatccatcatggttc
aacaggattgaagttagtaaagtagtatctatcatcaggaacctgacaaggggtggggat
gttcatgaatctgatataggagtaatcactccatatcgtcagcaagttgccaagataaag
aaagccctagagacatttgaaatacccgacttgaaagtcggaagcgtcgaacaattccag
ggccaagagagggaagtgataatcatctctacagtcaggtcgactgtaaagcataacgag
tttgacaaaaattttaacctgggattcttgagcaaccacaaaaggttcaatgttgctatc
actcgcgcaaaatcattgctcatcatcatcggaaacccttacattatcaccaaggaccgg
cactgggataggctcctgcgatactgtgctgacaatgactcttatcaaggatgccccctt
ccaccaccagaatctcattcttattcagacgataccggattcttctccaagtatgatgaa
gaccaaggtggaccttctggtcaggactacaaccaagaagctgcctactgcaactgcaac
caagaagctgcctactgcaactacaaccaagaaccgtctgacttcggtttgaggcatgac
actggtgctcaacctgcttctgagaatcaagtgttatggtctgaggagttgcctgaagat
gagaaccagccattgagcaacccccaagcagatcttgaggagatgccgaagcaggatgtc
gaagaaggggctgcacagggagatgcgcaggctgaccagttatcaaccaatgacaatcag
ctccaggatgcatccacggtgaagtacaccttccctcctggttggtgcgacgtttcgagc
atcccagcaacaggctggggcgattga
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