Miscanthus floridulus: 136508231
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Entry
136508231 CDS
T10264
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136508231
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
136508231
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
DUF1003
Caskin-Pro-rich
Motif
Other DBs
NCBI-GeneID:
136508231
NCBI-ProteinID:
XP_066358971
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All DBs
Position
15:61825739..61828268
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AA seq
651 aa
AA seq
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MSKSKSELDDLLLQAAGRTGKNQSRPSNPRWNSGGSGSDGFDDDDDSDTAPTYSRKKPSS
QVPLKKRHQPEKGVRRGGGGWKDEDDEDEDGRRSGGEDSDSAPSVGSDLYKDEDDKERLE
SMSELQREMILHDRGARRDDYKLKQRARASSSKTDKVGARKDSSPPPPPSRMRSSTRTDK
SGSAAKSALDELRAKRTMRQQDTEARNRFNVLLPHSGSPTRRRAGSPPSDGSNDGDNRGR
LNDHGRIADDGRDDEFDESPSRLDPLKFDDVKSITLRRSKLVKWFMEPFFDDLISGCFVR
LGIGKTKSGNPRYRLCIVRNVDASDPYRKYKLESYTTCKYLNVVWGSEADAARWQMTQVS
DSPPNEEEFKEWLQEAEKNGARILTRQEVLDKKEAIQEAYNFVYSAQTVQQMLKEKSAVR
RPINVAAEKDRLRSELEMALSRRNEGEAERIRAKLKNLQNRLQPVSKDDKAAKLEAMNRK
NRADNFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYASKPGGDNAEETANGSSSNV
VPSNEDMESKAQTGAAATTAAQVAAADAGKLIDTNAPVDLGTESNVLHTFELPISLSALQ
EFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcgaagtcggagctggatgatctgcttctgcaagccgccggccggacgggg
aagaaccagtcccggccgagcaacccgcggtggaattctggggggagcggctccgacggc
ttcgacgacgacgacgactccgacaccgcgccgacctactcgaggaagaagccttcgtcg
caggtaccgctcaagaagcggcaccagccggagaagggcgtccggcgtggcggtggtggg
tggaaggacgaggatgatgaggacgaagatgggcgtcggagtggcggggaggactcggac
agcgccccttcagtcgggagtgacctatacaaggatgaggacgacaaggagcgtctagag
agcatgtctgagctgcaaagggagatgatcctgcacgaccggggcgcccgccgcgacgac
tacaagctcaagcagcgggcacgtgcgtcctcgtccaagacggacaaggtgggtgcgcga
aaggatagcagcccacccccgccgcccagccggatgcggtcttcaacccgaactgacaag
tctggatctgccgccaagagcgcgctggacgagctgcgggcaaagcggactatgcggcaa
caggacacggaggcacgcaacaggttcaatgtcctgctcccacatagtggctcaccgact
aggcgcagggctgggagccctccaagtgatgggagcaacgatggtgataacaggggtagg
ctgaatgaccatgggaggattgctgatgacggcagggatgatgaatttgatgaatcgccg
agtaggcttgacccactcaagtttgatgatgtgaagagtattaccctcaggaggtcaaag
ctggtgaaatggttcatggaaccattctttgatgatctaatttctgggtgttttgtgcgg
ctaggtattggcaagacaaagtctgggaacccaagatacaggctgtgcatagtgaggaac
gtggatgcaagcgatccgtatcggaagtacaaactggagagctacacgacatgcaaatat
ctcaatgttgtctggggtagtgaggctgatgctgcacggtggcagatgactcaggtatca
gactccccacccaacgaagaagagtttaaggaatggctgcaagaggctgagaagaatggt
gcacgtatactgactcgtcaggaagtgctggataagaaagaagccattcaggaggcctat
aactttgtgtattcagcacaaactgtacagcagatgctgaaagagaaatcagctgtgaga
cgccctatcaatgttgctgctgagaaggatcggttgaggagtgagttggagatggctctg
agccgtaggaatgaaggtgaagcagagaggattcgtgcgaagctgaaaaatctgcaaaac
aggctgcagccagtgtcaaaagatgataaggctgcaaagttggaggctatgaaccggaag
aaccgtgctgataacttcaagaatgcttcagaactgaaacctgtaaatacatctttgaag
gcaggagaggctggatatgaccctttctcaaggaggtggacaagatcaagaaactattat
gcatcgaagccaggaggagataatgctgaagaaactgccaacgggtccagtagcaatgta
gtgcctagcaatgaagatatggagagcaaggctcaaactggtgcagcagccacaacagca
gctcaagtggcagcagctgatgccgggaagctcatcgataccaatgcaccagtggatctg
ggaacagaatcaaatgtgctgcatacatttgagcttcctatatcattgtctgctctgcaa
gaatttggtggagccaagggcctgttcgatggttacatggcaaggaggcagaagatagaa
gctacaatggggtacaaagtccctgacaacgatgggaggaggcatgctttaaccctgagt
gtgagtgattacaaacggcgacggggtctcctctga
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