Miscanthus floridulus: 136508270
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Entry
136508270 CDS
T10264
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136508270
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mflo01002
]
136508270
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136508270
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136508270
Peptidases and inhibitors [BR:
mflo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
136508270
Ubiquitin system [BR:
mflo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
136508270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
136508270
NCBI-ProteinID:
XP_066359020
LinkDB
All DBs
Position
15:56851550..56869563
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AA seq
1122 aa
AA seq
DB search
MTMMTPPPLEQQQEDDEMLVPHQELSVAGPEAAPQPMEVVAQTEPANTAESQPPEDPQTS
RFTWTIESFSRLNTKKHYSDVFVVGGHKWRVLIFPKGNNVDHFSMYLDVADSGNLPYGWS
RYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVV
EADVAVRRMVDYWTYDSKKETGFVGLKNQGATCYMNSLLQTLYHTPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTAVEGTIEQLFEGHHINYIECINVDYKSSRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAERYGLQDARKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPL
QLDLDRDNGKYLSPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDE
KDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKIARDEDLKEQIGNNIYFDLVDHEKV
RSFRIQKQLPFTSFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTHHEEAQSVGQL
REVSNKAHNAELKLFLEVELGPELCPIRPPEKSKEDILLFFKLYNAEKQELRFVGRLFVK
ALGKPSEILTKLNEMAGFSPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICF
QTAPVPDGDTQVRYPDVPSFLEYVHNRQVVHFRSLDKPKENDFSLELSKLHTYDDVVERV
AHQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPL
PELQCLKTLKVAFHHATKDEVVVHSIRLPRNSTISDVITDLKTKVELSNPDAELRLLEVF
YHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQN
FGDPFLMVIREGETAAEVMERIQRKLRVPDEEFSKWKLAFISMNRPEYLQDTDVVSARFQ
RRDVYGAWEQYLGLEHTDTTSKRSYTANQNRHTYEKPVKIYN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacgccgccccctctcgagcagcagcaggaggacgacgagatgctggtg
ccgcaccaggagctctctgttgctggcccggaagccgccccgcagccgatggaagttgtt
gcgcagacagagcccgccaacacagcggagagccagccgcccgaggacccgcagacgtcg
cgcttcacctggacgatcgagagcttcagccgtcttaacactaagaagcactactctgat
gtgtttgtcgttggaggacacaaatggcgtgtgctaattttccccaaggggaacaatgtg
gatcacttctcgatgtatttggatgttgcggattctgggaacctgccatacgggtggagc
cggtatgctcagttcagcttggctgttgtgaatcagatccacccaaagtatacgattcgg
aaagatacccagcaccaatttaatgcacgcgagagcgactggggtttcacatcatttatg
cctttgagtgacctatatgacccaagcaggggctatcttgtgaatgacaccgttgttgta
gaagctgatgttgctgtccgcagaatggttgattattggacttatgactcgaaaaaagaa
acaggttttgtaggtcttaagaatcaaggtgctacctgttatatgaactctctccttcaa
acgttataccatacaccatattttagaaaggctgtatatcatatgccaacaactgagaat
gacatgccatctgggagtatccctttagccctgcagagccttttctacaagctccagtat
agtgacaacagtgtagcgacgaaagagttgaccaaatcctttggatgggatacttatgat
tctttcatgcaacatgacgtgcaagaactcaacagagttctttgtgagaaactggaagat
aagatgaagggaactgctgtggaaggaacaattgaacaattatttgaaggccaccacatt
aattacatcgagtgtattaacgtagactataaatctagcagaaaagaatcattttatgat
ctacaacttgatgtgaaaggttgtcgtgatgtttatgcatcatttgataaatatgtggaa
gtggagcgtctagagggcgataacaaataccatgcggagcgatatggcttacaggatgca
aggaaaggtgtgctcttccttgatttccctcctgttttgcagcttcaactgaagcgtttt
gaatatgattacatgcgagatacaatggttaagattaatgaccgctatgagtttcctctt
caacttgatcttgatagagacaatggaaaatatctttctccagatgcagatcgaagtatt
agaaacctctatacgcttcacagtgttcttgttcatagtgggggagtacatggtggtcac
tactatgctttcattcggccgacactctcggatcagtggtacaaattcgatgatgagcgg
gttacaaaagaagacactaaaaaggcacttgaagagcagtatgggggtgaggaagagttg
cctcaaataaaccctggtttcaataacacaccattcaaattcacaaagtattcgaatgcc
tatatgcttgtctatatacgtgagagtgacaaggagaaaataatgtgtaatgtcgatgag
aaggatattgctgagcatttgcgtataaggttgaagaaagaacaagaagagaaagagcac
aagaagaaggagaaggctgaagctcatctctacactatcataaagattgctcgagacgag
gatttgaaggagcagattggtaataatatatattttgacttggtggaccatgaaaaagtt
cgcagcttccgcattcagaagcagttgccttttacttcattcaaggaggaagttgcaaag
gaatttggcatccctgtacagtttcagcgcttctggttgtgggctaagaggcagaaccat
acataccggccgaatcgtccattgacccaccatgaggaagcacaatcagttgggcagctt
agggaagtctcaaataaggcacacaatgctgagctgaagttgtttctagaagttgaactt
ggaccagagttatgtccaattcgtccacctgagaagagcaaagaagacatacttcttttc
ttcaagctttataatgctgagaagcaagagcttcgttttgttggtaggctttttgtgaag
gctctgggaaagccatctgaaatattgacaaaactgaatgaaatggctggattttctcca
aatgaagaaattgagctatatgaggaaattaagtttgagccaaatgtgatgtgtgaacat
attgacaagaaacttactttccgttctagtcagcttgaagatggagacatcatctgtttc
caaacggctcctgttccagatggtgatacacaagtgcgctatccagatgttccttcattc
ttggagtatgttcacaataggcaggttgtgcactttcggtctctggacaaaccaaaggag
aatgatttttctttggaattgtcaaagcttcatacttatgatgatgttgttgagagagtt
gcacatcaacttgggttggatgatccctcaaagattcggcttacatctcacaattgttat
tctcagcaacctaaaccacagcctattagatataggggagtagaacatctactggatatg
cttgttcattataatcagacttctgatatcttgtattatgaggttctggacattccactg
ccagaattgcagtgtttgaaaacacttaaagttgcattccaccatgcaacaaaagacgag
gttgtcgttcatagcataagacttccaagaaatagcactatcagtgacgtgattactgat
ttgaaaaccaaggttgaactatctaatcctgatgctgaactccgcttgcttgaagtattt
taccataagatttataagatctttccgcctcatgagaagatagagaacataaatgatcag
tactggacattacgagctgaggagatcccagaggaagagaagaatctcggcccacacgat
cgattgattcatgtttaccatttcatgaaagaccctaatcagaatcagcagattcagaat
ttcggagatccttttttgatggttatccgtgaaggtgagactgctgcagaggtaatggag
cgcatccagagaaaacttagagttcctgatgaggagttctccaagtggaagcttgcattc
atatccatgaaccggccagagtacctccaggacactgatgttgtatcagcgcgttttcag
aggagagatgtgtatggtgcttgggaacaataccttggcttggagcacactgatacaaca
tcgaaaaggtcttacacagccaatcagaatcggcacacctatgagaagcccgtgaaaatt
tataattga
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integrated database retrieval system
