Miscanthus floridulus: 136508615
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Entry
136508615 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 11
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136508615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136508615
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136508615
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136508615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
136508615
NCBI-ProteinID:
XP_066359429
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All DBs
Position
15:15539377..15540936
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AA seq
335 aa
AA seq
DB search
MSSQQQQKRVAEQDGEHANGAKRSRELAITNGEVKQEQREQAGEEAGQGGQGEGALVAVV
QAMEEPQINIRMAVSHLHCHACVLPLKPPTFECEAGHVVCRDCRGSHVQACAGAGTYVPC
AKLDGVVRDAKVACAYDSYGCTNWVAYHESSDHHRSCRFAPCFCPVPGCGNFTSPARLAE
HFFSHHAWPVTEVDYAKPCKLAVPVPEEKLVLVGKADGSVFLVYPCAFGAATAVSLVCVR
ACGDAAAGAPQYTCNLWAEVAGNSLVLTSVVASSDLAGGFPATDKVMFLPLPPLLYGESG
EPPALMARINKVGASTIRSSPSATPPSSLPSRMLH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccagcagcagcagaagagggtcgctgagcaggacggcgagcacgccaacggc
gccaagaggtcaagggagctggccataaccaacggcgaggtgaagcaggagcagcgcgag
caggcaggagaagaggcaggccaaggtgggcagggagagggagctctggtggcggtggtg
caagccatggaggagccgcagatcaacatccggatggccgtgtcccatctccactgccat
gcctgcgtcctgcccctcaaaccccctaccttcgagtgcgaggccggccacgtcgtgtgc
cgcgactgtcgcggcagccacgtccaggcctgcgccggcgccggcacctacgtcccctgt
gccaagctggacggggtcgtgcgcgacgccaaggtggcgtgcgcctatgattcgtacggc
tgcacgaactgggtcgcctaccacgagtcgtcggaccaccaccgctcctgccggttcgcg
ccctgcttctgcccggtccctggctgcgggaacttcacctcgccggcgaggctggccgag
cacttcttcagccaccacgcctggcccgtcaccgaggtcgactacgcgaagccgtgcaag
ctcgccgtcccggtccccgaggagaagctggtcctggtgggcaaggcggacgggtccgtg
ttcctggtgtacccgtgcgccttcggcgcggccacggccgtgtcgctggtgtgcgtgagg
gcgtgcggcgacgcggccgcgggggcaccccagtacacctgtaacctctgggcggaggtc
gcgggcaacagcctggtgctcacgtccgtggtggccagcagcgacctggccggcggcttc
ccggcgaccgacaaggtcatgttcctgccgctgccgccgctgctgtacggcgagtccggc
gagccgcctgccctcatggcccgcatcaacaaagtcggcgcgtccactatcaggtcgtcc
ccgtccgccactccgccgtcgagcctgcccagcagaatgctgcattaa
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