Miscanthus floridulus: 136508682
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Entry
136508682 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136508682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136508682
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136508682
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
136508682
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136508682
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136508682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
SERTA
Mitofissin
Motif
Other DBs
NCBI-GeneID:
136508682
NCBI-ProteinID:
XP_066359528
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All DBs
Position
15:complement(26884010..26886833)
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AA seq
199 aa
AA seq
DB search
MVAEGKRWRFAMVCSSNMNRSMEAHSQLGRAGLDVESYGTGTHVKLPGPSLHEPNVYDFG
TPYGAIYDDLRRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNTGDGMFDMIMTFEERVF
DLVVEDMSNREPRLMKCVLIINMDVKDNHEEAVVGAKLAVELCQKLEAIDGDWEGIIDDL
ITAFEKQHKRRLAYSISFY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgagggaaagaggtggcggttcgcgatggtgtgctcctcgaacatgaaccgg
agcatggaggcgcactcgcagctaggccgcgcggggctcgacgtcgagtcctacggcacg
ggcacccacgtcaagctccccggcccctccctccacgagcccaacgtctacgacttcggc
accccctacggcgccatctacgacgacctccgccgcaaggaccccgacctgtacaagagg
aatgggttgctgcctatgcttaagaggaacacctcggtgaagctggcgcctcagcggtgg
caggacaacaccggcgacggcatgtttgatatgataatgacctttgaggagagggtcttc
gacttggttgttgaagatatgagtaatcgcgagccgaggctgatgaagtgtgtgctgata
ataaatatggatgtcaaagataaccatgaagaagctgtagttggggcaaagcttgctgta
gagttgtgccagaagcttgaagcaattgatggtgactgggagggcataattgatgacctg
attactgcatttgagaagcagcacaagcggaggcttgcatacagcatttcattctactaa
DBGET
integrated database retrieval system