Miscanthus floridulus: 136509558
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Entry
136509558 CDS
T10264
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136509558
Spliceosome [BR:
mflo03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
136509558
Other components
Complex C specific factors
136509558
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
CENP-Q
DUF7504
Motif
Other DBs
NCBI-GeneID:
136509558
NCBI-ProteinID:
XP_066360419
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Position
15:78115265..78118368
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AA seq
843 aa
AA seq
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MAEEAEGMDRFDMEGDFEGGRFGRDGEFYYRSRRERAPQTRDDAIYGVFAEGDSDYDSED
DEESRRRRRKRRKDGGGGEADLTKPVQFVSTGKFMPTQEPEPEERPGLGRSDATTDKAEV
AEAEEEQDDEGDTEMLPAMFGKIRDGARARREEKEREREAAARRRQAAGLGAGDPAAAPG
SLESNSKVAKMMLMMGYKKGMGLGKNQQGITAPVESILRPKNAGLGSVEGFKEPKTLLPK
ENVPAPPPPPASALKEKRWYKKANTKKAPILTKNELLAMRTEQEQEEQPAIVQKVIDMRG
PQARVLTDLKGLNEEQEMEANDVPMPELQYNVRLLVDEARADIVRLDAQLRREQEKVASL
VREKEKVAKQEASQKRQLLVMERIAETLEKVREDDTSGMLTLDGLIQTFHGLKVQFEEEF
KMCSIAWIACRYAHPLLIRVFQGWQPLQDPKFGLEVMRKWKDLLQGDQPYNFSDSAASMT
PYVQLVSEVILPAVRISGINSWEAREPEPMLHFLELWDNKKLLPPVLLQSILEHVIMPKL
SAAVDSWDPRRESVPIHVWVHPWLPMLRERIETLCHSIRYKLSTVLHVWQAHDASAYAVL
SPWKDVFDSASWEDLIVRYIIPKLRLALQDFQINPANQKLDQFNWVMLWASAIPVHLMVH
MLEVDFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRILLTAGLDMM
NQAAEGLEVVQPGARENVGYLRATEKRQFDAAQQAYHAVPGAAMADLSFKESIQAYAMEQ
GLLFMPRVGKFYNGMPVYEFGTVSVCIDSVKRLLYAQLQEGVERWSAVTLTQLMDMNRMG
RAH
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcggaggggatggaccggttcgacatggagggggacttcgagggcggg
cggttcggccgcgacggggagttctactaccggagccggcgggagcgggcgccgcagacc
cgcgacgacgccatctacggggtcttcgcggagggcgactccgactacgactcggaggac
gacgaagagtcccgccgccgccgcaggaagcgccgcaaggacggcggcggcggggaggcc
gacctcaccaagcccgtccagttcgtctccaccggcaagttcatgcccacccaggagccc
gagcctgaggagaggccggggctcgggcgctccgacgccaccactgataaggcggaggtg
gcggaggcggaggaggagcaagacgacgagggggacaccgagatgctgccggcgatgttc
ggcaagatcagggacggcgcgcgcgcgaggcgggaggagaaggagcgggagcgtgaggcg
gcggcgcgccggcgacaggcggcgggtctcggggcgggggacccagccgcggctcctggg
agcctggagtcgaactccaaggtggccaagatgatgttgatgatggggtacaagaaaggc
atgggccttggcaagaatcagcaggggatcaccgcaccggtggagtccattctgcgaccc
aagaatgcaggcctggggagcgtcgaggggttcaaggagcccaagaccctgttgcctaag
gagaacgtgccggccccaccacctccaccggcatcagcgttgaaggagaagcgttggtac
aagaaggctaacacaaagaaggctccaatcttgacgaagaatgagctcctggccatgcgt
actgagcaggaacaggaggaacagcctgctattgtccagaaggtgatcgacatgcgaggg
ccacaggcgcgggtgctgacagatttgaaggggctcaatgaagaacaagagatggaggcg
aatgatgtgcccatgccagagctgcagtacaatgtgcgcctgcttgttgatgaggctaga
gctgatattgtgaggttggatgcacagctgcggcgggagcaggagaaggtggctagcttg
gtgcgggagaaggaaaaggttgctaagcaagaggcatcgcagaaacgccagctgctggtg
atggagagaattgcagagacactggagaaggtccgggaggatgatacatccggcatgctc
actctggatggattgattcagacattccatgggttgaaggtgcagtttgaggaggagttc
aagatgtgtagcattgcatggattgcttgccgatatgctcatccattgcttatccgtgtc
ttccaggggtggcagcccctgcaggatccaaagtttgggttagaagtcatgagaaaatgg
aaggacctgctgcagggggaccaaccatataacttctcagatagtgctgcatcaatgacg
ccatatgtgcagcttgttagtgaagtcatcctaccggctgtgaggatatcaggaatcaat
tcgtgggaggctagggaaccagaaccaatgctccactttcttgagttatgggataataag
aagttgctgcctcctgttttgcttcaatcaatactggagcatgtaatcatgccaaagctc
tcagctgccgtggattcatgggatcctcgcagggaaagtgtaccaatccatgtctgggtg
cacccatggctgccaatgctaagggaaaggatagagaccttgtgccattctattcgatac
aagttgagcactgtcctccatgtatggcaagcgcatgatgcttcagcatatgcagtgttg
tctccgtggaaagacgtgtttgattcggcaagctgggaagacctgattgtgcggtatatc
attcctaaactgagattggcactgcaagactttcagatcaacccagcaaaccagaagctc
gatcagttcaactgggtgatgttgtgggcatctgcaatcccagtacacctcatggtccat
atgttggaagttgatttcttcagcaagtggcagcaggtcctgtaccattggttgtgctca
ccaaatcctgatttcaatgagataatgaactggtataagggatggaagggccttttccca
ccagagttacttgccaatgagcgcatacggattctgctaactgctggtcttgacatgatg
aaccaagctgctgaaggacttgaggtagtgcagcctggggctagggagaatgtgggttac
ttgagggcaactgagaagcggcagtttgatgcagcacagcaagcttaccatgctgtccca
ggagcagccatggcggatttgagcttcaaggagtctatacaggcatatgcaatggagcaa
ggtttgctatttatgcctagagttggcaagttctacaatggcatgccagtttatgagttt
ggcaccgttagtgtttgcatagactctgtgaagcgactactgtatgcacaacttcaagag
ggtgttgagagatggagtgctgtaactcttacacaattgatggacatgaaccgaatggga
agagcacactag
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