Miscanthus floridulus: 136510106
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Entry
136510106 CDS
T10264
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136510106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136510106
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136510106
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136510106
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_5
DZR_2
Motif
Other DBs
NCBI-GeneID:
136510106
NCBI-ProteinID:
XP_066360769
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All DBs
Position
16:28396825..28433941
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AA seq
384 aa
AA seq
DB search
MPITAPTPDMLRQSQNVRTLNENALAACTAVVGDIIRSTLGPRGLDKLRGGGGPPPALIR
LVEGEREMNPQTEAANLNAGDDPMAKKKNVDDNADLIDENGALAVTLEDGGDALDCGVCY
LPLRPPIFKCELGHVVCSACRDKLEATGNGVCHICGVATRGYRRCHAMENLVDCIRIPCP
YAAHGCDTTFPFHGQESHRQVCRHTPCRCRGDGESCGFIGSTAALLDHFACAHNWPCTTK
VRAGETFSIHLRVGFNFFLLEDHGRGGDGDQALPVPNLFLMNVMRERLGRAISVLCIHPH
ASTTAAANGAQELPLTQCELVFSRYGDRSLCHSHSQSSVFKVVCTDLSIGLLNPEGCFQF
FVPNAVLGVGDDKNSIQIKARIIN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcacagcaccaactcccgacatgctccgccagagccagaacgtccgcacgctg
aacgagaacgcgttggcggcttgcacggcggtggtgggcgacatcatcagatccacgctc
ggcccccgcggtctcgacaagctacgtggtggtggtggacctcctcccgctctgatccgt
ttagtggaaggagagagggagatgaatccacaaacggaggcagccaacttgaatgctggt
gatgaccccatggcgaagaagaagaacgtggacgataacgctgacctcatcgatgagaac
ggggccctggccgtgacattggaggacggcggcgacgccctcgactgtggcgtctgctac
ctcccgctcaggccgcccatcttcaagtgcgagctggggcacgtggtgtgctccgcctgt
cgcgacaagctggaggccaccgggaacggggtgtgccatatctgtggcgtcgccacgcgc
ggctaccgccggtgccacgccatggagaacctcgtggactgcatccgcatcccctgccca
tacgcggctcacggctgcgacacaacgtttcccttccatggacaggaaagccaccgccag
gtgtgccggcacacgccgtgccgctgccgtggcgacggcgagtcgtgcggattcatcggc
tccacagccgcgcttctggaccacttcgcctgtgcgcacaactggccatgcaccaccaag
gtaagggccggggagacattcagcatccatctgcgtgttggattcaacttctttctgctc
gaggaccatggccgtggtggcgatggtgaccaagcgctccctgtcccgaacctgttcctg
atgaacgtgatgcgggaacggcttggccgtgccatctctgtgctttgcatccatcctcac
gcatccaccaccgctgctgccaatggtgctcaagagctgccgttgacgcaatgcgagctg
gtcttctcgcgctacggcgacaggagcttgtgccatagccactctcagtcgtcggtgttc
aaagtggtgtgcacggacctctccattgggctgctcaaccctgaaggctgctttcagttc
ttcgtgcccaacgccgttcttggggttggggacgacaagaattctatccagattaaagcc
cgtatcatcaactag
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