Miscanthus floridulus: 136510162
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Entry
136510162 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136510162
03036 Chromosome and associated proteins [BR:
mflo03036
]
136510162
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136510162
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136510162
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136510162
microRNA pathway
RISC loading complex
136510162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_2
Transposase_21
ArgoN
PAZ
ArgoL1
Transpos_assoc
RVT_1
Motif
Other DBs
NCBI-GeneID:
136510162
NCBI-ProteinID:
XP_066360815
LinkDB
All DBs
Position
1:10780145..10789138
Genome browser
AA seq
1622 aa
AA seq
DB search
MESVRMLHAVAAQRNWLVHHMDVKSAFLNGELQEEVYVQQPPGFTAAGHEGKVLKLKKAL
YGLRQAPRAWNAKLDKTLRELGFARCASEHGMYTRGGAAERVVVGVYVDDLIITGARQED
VEAFKEQMRRMFRMSDLGLLSFYLGLEVKQGGDGIRLGQAAYARKLLEKAGMTACNPCHT
PMEVRLKLSAKSTTPEVDATMYHSLVGSLRYLVHTRPDLAFAVGYVSRFMETPRQEHLAA
VKHILRYIAGTVNYGLFYPKLGDIGNMLTGYELEGYSDSDLGGDIDERRSTGGVIFFLGE
MPVSWQSQKQKTVALSTCEAEYMAGAAGACQAVWLVRLLGDITGVKVQPPILKMDNQSAI
ALSKNPVLHDRSKHIDTKYHFIRECVENGRIFVEHVSTEEQLADVLTKSLGRARFKSEKA
AVFQAAPNHRVHLCFALSVLGFRRSSSTSPAAGAGEATTTPSLRIRRPGPGVAATPECLS
RGGQQVTAPVPVPSSAPTPAEVEAMRRQVERKMVMAEAQAGPRQGLSSSQAPAPRPAMQG
KARSVGICREPVVVPSAVSGVLSGTCGATGHAFMQQGKPPGHVAPAASSSSFPALAPVQG
TTPGRPALQGKPPGQVAPPASPSKFPALAPVQGPTPGRPAMQQGKLPGQVAPAVRASSLP
APVQGPVPGRPAMQVRPPGQVAPAVRPSSSLPASAPVQGPTPGRPLVQVRPPGQVALAAS
PTSLPAPAPVQGPVPGRPAMQVRPPGQVALAASPTSLPAPPVQGPVPGRPSMQVRPPGHV
APAASPSSLPAPAPVQGPVAGRPAMQVRPPGQVAPASGPQMQGKAPAGQVALSAPAGTLP
PASSKAMVFPARPGYGTVGRRCRVRANHVHVQLADTDIYHYADVAIAPESVSRARNRWII
NELVSLHKQHLDGRLPVYDGRKSLFTAGPLPFKSKEFVLNLTNPERASQGEKEYRVAIKN
AAKIDMYSLKMFLAGRNRDLPQNTIQALDIALREFPTASSGGRYISISKSFFSPQAFGNG
GNLGNGVECWRGYYQSLRPTQMGLSLNIDVSATSFFKAQPVIDFAVEYLNLHDTSRRLSD
QDRIKLKKALKGVRVATKHRHDISMRYRITGLTSAPLNDLTFDQNGTRISVVQYFKRQYN
YLKYTHWPCLQAGSASKQMYLPIEVCSIVEGQRYSSKLNENQVRNILKLACERPSEREGR
TLEIMSRYWMYNADRRSQDFIEGMHYFLGVAKANKRDGFMCCPCAICKNLKEYSSSISLH
SYLLKSGFMSNYICWTKHRESGVMMKEGEGEDLDIDDIIAQYGAFDDTTMGRDEEEVVAE
DDLSDALGDAIRDAQQECESEKEKVKFERMLEDHRKLLYPTAEEGQKKLGTTLELLQWKV
KNSVSDKAFRNLLNLIKKMIPKPNELPTTTYEAKKVVCPLGLKIQKIHACSNDCILYHDN
EYENLDEYPVCKATRYKIRRDDPGGVEGEQCPRKKIPDKVMWYAPIIPRLKRLFRNKDHT
KLLRWHKEDRKVDNMLRHPADGSQWRAIDREFLEFANEARNLRFALSTNGMNPFGEQSTS
HSTWPVTLCIYNLPPWLCMKRKFIMMLILIQGPRQPSNDIDVYLKPLVEELLVLWNKPGV
RV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggtgcgcatgctccatgctgtcgccgctcagaggaactggcttgtgcatcac
atggatgtcaagtcagcgttcctaaatggcgagctccaggaggaagtatatgtccagcag
ccgccaggtttcactgctgctggacatgaaggcaaggtcctgaagctcaagaaggcgttg
tacgggcttcgtcaggctccccgtgcatggaacgcgaagctggacaagaccctgcgcgag
ctaggtttcgccaggtgcgccagcgagcatgggatgtacaccagaggaggcgcagcggag
cgagtggtggttggtgtctacgtcgacgacctaatcatcaccggagcaaggcaggaggac
gtcgaggcgttcaaggagcagatgaggcgcatgttccggatgagcgacctcggcctgctg
tcattctacctcgggctcgaggtgaagcaaggtggcgacggcatcaggctgggacaagcc
gcatatgccaggaagctgctggagaaggcagggatgacggcgtgcaatccctgccacacg
ccaatggaggtccggctcaagctctctgccaagagcaccacgccggaggtcgacgccacg
atgtaccatagtcttgtcgggagcctgcgatacctggtgcacaccaggccagatctcgcg
ttcgcggtgggctatgtgagccgtttcatggaaacgcctcgacaggagcacctcgctgcc
gtcaagcacattctgcgctacatcgccggcacagtcaactacgggctgttctaccccaag
ctcggcgacatcggcaacatgctaactgggtacgagctggaggggtatagtgacagtgac
ttggggggagacattgacgagaggaggagcaccggtggagtcatcttcttcctgggtgag
atgccagtgtcctggcagtcacagaagcaaaagacggtggccctctcgacgtgtgaagca
gagtacatggcgggcgcggcaggagcgtgccaggctgtgtggctcgttcggctgctgggc
gacatcactggcgtcaaggtccagccgccgatcctgaagatggacaatcaatccgccatt
gcactaagcaagaatcccgttcttcatgacagaagtaagcacatcgacactaaatatcat
ttcatccgtgaatgtgtggagaacgggagaatcttcgtggaacacgtgagcacggaggag
cagctcgcggatgtgctgacaaagtcacttgggcgagcgcggttcaagtcagaaaaagcg
gcggtttttcaagcggcaccaaatcaccgcgttcacctgtgtttcgcgttgagtgtgttg
ggattccgcaggtcgtcttctacgtctccggcggcgggcgccggcgaagcgacgacaaca
cccagtctccgcatccggcggccgggcccgggcgtggcggctactccggagtgcctcagc
aggggcggccagcaggtgacagcgccggtgccggtgccctcctcggcgccgaccccggcg
gaggttgaggcgatgagacgacaggtggagaggaagatggtgatggccgaggcgcaggcg
ggtccgcgccagggcttgtcgtcctcacaagcaccggcgccgagaccggcaatgcaaggt
aaggcccggtcagttggcatctgcagggagcccgttgtcgttcccagcgcagtctccggc
gtcctttcaggcacctgcggtgcgaccggccatgcattcatgcaacaagggaagccgccg
ggtcatgtcgcaccggcagcgagctcatcgtcgtttccagcgctggcgccggttcagggc
actacgcccgggcgaccggcccttcaagggaagccgccgggtcaggtcgcaccgccagcg
agcccatcgaagttcccagcgctggcgccggttcagggccctacgcccgggcgacctgcc
atgcaacaagggaagctgccgggtcaggtcgcaccggcagtgcgcgcatcgtcgctccca
gcgccggttcagggccctgtgcccgggcgaccggccatgcaagtgaggccgccgggtcag
gtcgcaccggcagtgcgcccatcgtcgtcgctcccagcgtcggcgccggttcagggccct
acgcccgggcgaccgctcgtgcaagtgaggccgccgggtcaggtcgcactggcagcgagc
ccaacctcgctcccagcaccggcgccggttcagggccctgtgccagggcgaccggccatg
caagtgaggccgccgggtcaggtcgcactggcagcgagcccaacgtcgctcccagcaccg
ccggttcagggccctgtgccagggcgaccgtccatgcaggtaaggccgccgggtcatgta
gcaccggcagcgagcccatcgtcgctcccagcgccggcgccggttcagggccctgtggcc
gggcgaccggccatgcaagtgaggccgccgggtcaggtcgcgccggcatcgggaccgcag
atgcaagggaaggcgccggccggtcaagtggcgctttcggcgcctgcaggtacgctgcct
ccggcttcgagcaaggcgatggtgttccccgcgcggccggggtacggaaccgtcgggcgg
aggtgccgggtgcgcgccaatcatgtccatgtccagctcgctgacacggatatctaccac
tacgccgatgtggcgatcgcaccagaatcggtgtcacgggcaagaaatagatggatcatc
aacgagctcgttagcttgcacaagcaacacttggacgggcggcttcctgtttatgatgga
agaaaaagcctcttcacggcaggtccgctgccattcaaatccaaagagtttgtgctcaac
ctaacaaaccctgagagagcaagccagggcgagaaagagtacagggtggcaatcaagaat
gctgcaaaaattgatatgtacagccttaaaatgttcttggcaggcaggaatcgggatctg
ccacaaaacactatccaggctctggatattgctttgagagaattcccaactgctagttcc
ggtggcaggtatatatcgatctcaaaatcgtttttctcaccacaagcatttggaaatggt
gggaatctaggaaatggtgtggaatgctggaggggttactaccagagcctacgccctaca
cagatggggttgtcccttaatatagatgtttctgcaacgtcatttttcaaggctcaacct
gttattgacttcgcagtggagtatctgaacctccatgatacttcaaggcgtttgtctgat
caggatcgcataaaactgaagaaagcacttaagggggtccgggtcgcaaccaagcataga
catgatatatccatgcgctacaggattacggggctaacctcagctccattaaatgatttg
acgtttgatcaaaatggcacaaggatatcagttgtgcagtacttcaaacgacaatataac
tacttgaaatacactcactggccatgccttcaagctggcagtgctagcaagcagatgtat
ttacctatagaggtttgcagcatagttgagggacaacgctactcaagtaagctgaatgag
aatcaagtcaggaatatcctgaagttggcctgtgagcgaccatcagagagggagggtaga
actttggagattatgtcacgctattggatgtacaatgccgatcgccgctcccaagacttt
attgagggcatgcactatttcttaggtgtggccaaggcaaataagcgggatggtttcatg
tgctgtccatgtgccatatgtaagaatttaaaggaatattcaagctcaattagtcttcat
tcatatttgcttaagtcaggttttatgtcaaactatatatgttggactaagcatagagaa
agcggggtcatgatgaaagaaggtgaaggagaagatttagacattgatgacattattgct
cagtatggtgcctttgatgatactacaatgggaagagatgaagaagaggtagtggcagaa
gatgatctcagtgatgctcttggcgatgccattcgtgatgcacaacaagaatgcgaaagt
gaaaaagagaaagttaagttcgagcgcatgcttgaggatcataggaagttgctatacccg
acggccgaagaggggcaaaaaaagctaggtacaacactggaattgctacagtggaaggta
aagaatagtgtatccgacaaggcatttaggaatttattaaacctcataaagaagatgatt
ccgaagccaaatgaattgcccaccactacgtacgaagcaaaaaaggttgtctgccctttg
ggattaaaaatccagaagatacatgcatgttctaatgactgcatcctctaccatgacaat
gaatacgagaatttggatgaatacccggtatgtaaagcaacgcggtataagatcaggcgc
gatgatcctggtggcgtcgagggtgaacaatgtcctagaaagaaaatccctgacaaggtt
atgtggtatgctcctataataccacgcttaaaacgtttgttcagaaataaagaccataca
aagttgttgcggtggcataaagaagaccgtaaggtagacaatatgctgagacacccagct
gatgggtcccagtggagagcgatagacagggaatttctagagtttgcaaatgaggctaga
aacttaaggttcgccttaagtacaaatggtatgaatccttttggggagcagagcactagt
catagcacttggccagttactctatgtatctacaaccttcctccatggttatgcatgaag
cggaagttcattatgatgctgatcctcatccaaggtccgaggcaacctagcaacgacatt
gatgtctatctgaagccattagttgaagaacttctagttttatggaacaaaccaggtgta
cgtgtctag
DBGET
integrated database retrieval system