Miscanthus floridulus: 136510190
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Entry
136510190 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136510190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136510190
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136510190
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136510190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
136510190
NCBI-ProteinID:
XP_066360831
LinkDB
All DBs
Position
16:complement(6070120..6072621)
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AA seq
373 aa
AA seq
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MDLAPAVVDLAPVTVVVVDAPAAAAVRSEGEGRRRGSAPCRSAPWRGREEGRRHGDASSV
GDAVVDAAATLLWRSLPPAMTLTTGYARLAAPSPASWGGEGDGGWPEERGGAPRRCIPLQ
CNEGHVVCSSCRDKLAPAGKCHVCGIATSSYHRCHALERLVESIRVPCPNAAHGCNTKPA
YYDHYGHCKTCPYAPYRCPSKECSFLGSTDALLDHFASAHGWPSTTKIGVFERHSICLYD
GFNFLLADCAEDDNHASTTTTISSSKYLFLLNVTRQSLGRAITVHLIGQESPSEILRCVL
SYSLVVYDPCERRKFVASHSLQSEINVECMDLSNGPPDPADCFHFVVPDSVLGDKNKEDP
IQVNVCISIINLQ
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatctggccccagccgtcgtggatctggccccagtcaccgtcgtcgtcgtggacgcc
ccagccgccgccgccgtgaggagtgagggggaaggccgccgtcgtggatccgcgccgtgt
cgatccgcgccatggagagggagggaggaaggccgccgccatggtgacgccagttccgtc
ggggacgccgtggtggacgccgccgccaccttgctgtggcggtccttgccgccggccatg
acgctcaccaccgggtatgcccgccttgcagcgccatcaccggcgtcatggggtggagag
ggagatggaggctggccggaggagaggggcggcgcgccgagacgatgcatacctctgcag
tgtaacgagggccatgtggtgtgttcgtcatgccgtgacaagcttgcaccggctggcaag
tgccatgtatgcggcattgccacaagcagctaccacaggtgccatgccttggagcgcctg
gtggagtccatccgcgtcccatgcccgaatgcggcccatggctgcaacaccaagccagcc
tactacgaccactatggccactgcaagacgtgtccatatgcaccgtaccgctgcccgagc
aaggaatgtagctttcttggctcaacagatgcgctcctggaccacttcgccagtgcacat
ggctggccttccaccaccaagattggtgtgtttgagaggcacagcatctgcctctatgac
ggcttcaacttcctccttgctgactgtgctgaggacgacaatcatgcaagcactaccacc
accatcagcagcagtaaatacctgttcctcctgaatgtgacaaggcagtcgcttggccgt
gccatcaccgtgcacctcatcggtcaggagtcaccctcagaaatactaagatgtgtgctc
agctattcactggtagtctatgacccttgtgagcgccgtaagttcgtggccagccattct
ctgcaatctgagatcaatgtggaatgcatggacctctccaatgggccgcctgaccctgcc
gactgcttccactttgttgtgccagattccgttcttggagacaagaacaaggaggatcct
atccaggtcaatgtctgtatcagcatcatcaatctgcagtag
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