Miscanthus floridulus: 136510470
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Entry
136510470 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136510470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136510470
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136510470
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136510470
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
zf-C3HC4_3
zf-TRAF_2
DUF7387
Motif
Other DBs
NCBI-GeneID:
136510470
NCBI-ProteinID:
XP_066360998
LinkDB
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Position
16:complement(27717898..27722774)
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AA seq
254 aa
AA seq
DB search
MAQGKRKSSDAHTSPRAIESFSRAVTHRYTGKSLRKEGDGVSQNSKGSGSYGPATLPPRV
RPDGAGVLELTVEDTDALDCGVCFLPLKPPIFQCSNGHVVCSLCHDKLKATGKCHVCGVT
TDGNSRCHAMERLAESIRFLCSNAAYGCTARLVYHDREGHWQQCPHGVAIGPLACVHGWP
SFTTALASGHFNVSLHDGFNFLRAEDHDSSSPGILFILNVVRMHLAVQSPCFASTPVPPT
MVRDSSQRNQSNAS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggggaaacgaaaaagttcagacgcccatacaagcccaagggcaattgagtca
ttctccagagctgttacccaccggtacacaggtaaaagcctccggaaggagggagatggc
gtctcgcagaacagcaagggctccggctcctatgggccggcaacgctgccgccgcgggtg
cggccggacggagctggggtattggagttgacggtggaggacactgacgccctcgactgc
ggcgtgtgcttcctcccgctgaagccccccatcttccagtgcagcaatggccatgttgtg
tgttcgttgtgccatgacaagctcaaggccactgggaagtgccatgtgtgtggcgtcacc
actgatggtaacagccggtgccacgccatggagcgcctggcagaatccatccgcttcctg
tgctcgaatgccgcctacggctgcaccgctaggctggtataccatgacagggagggccac
tggcagcaatgcccgcatggagttgctattggaccacttgcctgtgtccatggctggccg
tcgtttaccactgccctggccagcggccatttcaatgtaagcctccacgacgggttcaac
ttcctccgtgctgaggaccacgactccagcagcccgggcatcctgttcatactgaatgta
gtacgcatgcacttggccgtgcaatctccatgctttgcatcgacacccgtgccaccaaca
atggtcagggacagttctcaaaggaaccaatcgaatgcgagctaa
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integrated database retrieval system