Miscanthus floridulus: 136510481
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Entry
136510481 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136510481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136510481
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136510481
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136510481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
136510481
NCBI-ProteinID:
XP_066361006
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All DBs
Position
16:28453665..28454797
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AA seq
351 aa
AA seq
DB search
MRRRQRRLAEFDEDEEDSESHYEDEDLGSDSIHEHEEDSHEQASAVAAAPAPPDVRVRTR
TAVTNVTVCDADALECGVCFLTLRPPIFQCEVGHVVCSACRDKLEATRNGKCHVCRATMR
GGYRRCHAMERLVDCIRVPCPYAAHGCDATPAYHGQESHRQVCPHAPCHCPRESCGFMGS
TAALLDHFAGAHNWPCTTKVRAGEEFSIRLHVGFNFFLLADQGRDDGEQAATTGSVPCRL
FLLNVMQERLGRAISVLCIHPHTSCAAANGAQQLPLTQCELVFSRYGDRSSCRSHYQSSV
FRVLCTDLSNGLPNPEGCFQFLVPNAVLGVGDHKNSIQVKALIINGAQTAF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcgacagaggaggttggcggaattcgatgaggacgaggaggattcggaatct
cactacgaggacgaggatttgggcagcgacagcattcacgaacatgaagaagactcgcat
gaacaggcatcggcagtagcggcggcgccggcgccgccagacgtgcgtgttaggacgagg
accgcagtgacgaatgtgacggtgtgcgatgccgacgccctggagtgcggcgtgtgcttc
ctgacgctgaggcctcccatcttccagtgcgaggtggggcatgtggtgtgctcggcctgc
cgagacaagctggaggccaccaggaacggcaagtgccatgtctgccgcgccaccatgcgc
ggcggctaccgccggtgccacgccatggagcgcctggtggactgcatccgcgtcccctgc
ccgtacgcggctcacggctgcgacgcgacgcctgcctaccacggccaggaaagccaccgt
caggtgtgcccgcacgcgccctgccactgcccccgcgagtcgtgcggcttcatgggctcc
acagccgcgctgctggaccacttcgccggcgcgcacaactggccgtgcaccaccaaggtc
cgcgctggggaggagttcagcatccgcctccacgtcggcttcaacttcttcctcctcgcg
gaccaaggccgagatgatggtgagcaagcggccaccactggcagcgtcccgtgccgactg
ttcctgctgaacgtgatgcaggaacggcttggccgtgccatctcggtgctctgcatccat
cctcacacatcatgcgccgctgccaacggtgctcaacagctaccgttgacgcaatgcgag
ctggtcttctcgcgctacggtgacaggagctcgtgccgtagccactaccagtcgtcggtg
ttcagagtgttgtgcacggacctctccaatgggctgcccaaccctgaaggctgcttccag
ttcttggtgcccaacgccgttcttggggttggggaccacaagaattctatccaggttaaa
gcacttatcatcaacggtgctcaaacagctttttag
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