Miscanthus floridulus: 136511738
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Entry
136511738 CDS
T10264
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136511738
Transcription machinery [BR:
mflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
136511738
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Dicty_REP
DUF4407
Motif
Other DBs
NCBI-GeneID:
136511738
NCBI-ProteinID:
XP_066361875
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Position
16:complement(118134963..118137379)
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AA seq
511 aa
AA seq
DB search
MTSTVTTPSRPLAAGSRPRRSGPAVLSLSKGSSSPRRRQAPSTSCAALASPEKERTRNKL
PPPPPSRTAAAAAATEQQQQEEEKATDYNEVAAVLESIYKLSPAVEVEEEKRHGSGDEDD
EGEGGKAKKKKKRKSRVAGRSTVIVKSRRRRRGRRMDLGKRVEMKSAAATSREQQQGEED
DGEREFEEMLLREHSVSTDMGSLDWKRMKIPPVLTSSQSARLFKTMQPMKAIFEVQESLR
EELQRDPTDAELAEATGMTVHQLRRRLDVGRAARNKLIKHNLRLVPYAINKYYPDMGTDE
RFDDLCQAGANGLITAIDRFEPKRGFRISTYALFWIRHSIVRAMTLSSFTRFPFAMESER
QEIGKAREELAFELGRPATDEEVRRKVGISPQRYRAVLRMTRPTYSLHARNRVTQEELIN
EVTDDDAIGVDAGGRHNTLLRLAIDDLLDSLKPKESLVIRQRFGLDGRGKRTLSEIAGNL
SISREMVRKYELKALMKLKHPTRVEYLRRYM
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgacgacgcccagccggccgctcgccgccgggagccggccgcggcgg
tccggtcccgccgtgctctcgctcagcaagggtagtagcagtcctcggcggcgccaggcg
ccgtccacgagctgcgccgcgctcgcgtcgcccgagaaggagcgcacgcgcaacaagctc
ccgccgccaccgccgtcgaggaccgccgccgcggcggcggctacggagcaacagcagcag
gaggaggagaaggccacggactacaacgaggtcgcggccgtgctggagagcatctacaag
ctcagccccgccgtggaggtcgaggaggagaagcgccacggcagcggcgacgaagacgac
gaaggcgagggcggcaaggccaagaagaagaagaagaggaaaagcagagtggcgggccgg
agcacggtgatcgtgaagagccggcggcggcggcgcgggaggaggatggacctggggaag
agggtggagatgaagagcgccgccgctactagcagggagcagcagcagggggaagaggac
gacggagagcgcgagttcgaggagatgctgctgcgggagcactcggtgtccacggacatg
ggcagcctggactggaagcgcatgaagatcccgccggtgctcacctcgtcgcagagcgcg
cgcctcttcaagaccatgcagcccatgaaggcgatcttcgaagtgcaggagagcttgcga
gaggagctgcagagggaccccaccgacgcggagctcgccgaggccaccggcatgaccgtc
caccagctccgccgccgcctcgacgtcggccgggccgccaggaacaagctcatcaagcac
aacctccggctggtgccgtacgccatcaacaagtactacccggacatgggcaccgacgag
cggttcgacgacctgtgccaggcgggcgccaacgggctgatcacggccatcgaccggttc
gagcccaagcgcgggttccgcatctccacctacgcgctcttctggatccggcactccatc
gtgcgcgccatgacgctgtccagcttcacccgcttcccgttcgccatggagtcggagcgg
caggagatcggcaaggcccgggaggagctggcgttcgagctcggccggccggccacggac
gaggaggtgcggcggaaggtgggcatctccccgcagcggtaccgcgccgtgctgcggatg
accaggcccacctactcgctgcacgccaggaaccgcgtcacgcaggaggagctcatcaac
gaggtcaccgacgatgatgccatcggcgtcgacgccggcggcaggcacaacacgctgctc
cgcctcgccatcgacgacctcctggactctctgaaacccaaggagagccttgtgatcagg
cagcggttcgggctggacggcagggggaagcgcacgctcagcgagatcgccggcaacctc
agcatctcgcgggagatggtgcgcaagtacgagctcaaggcgctcatgaagctcaagcac
cccacaagggtggaatacctgcgcaggtacatgtga
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