Miscanthus floridulus: 136511941
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Entry
136511941 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136511941
Enzymes [BR:
mflo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
136511941
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136511941
Prokaryotic type
136511941
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
NOMO_12th
Motif
Other DBs
NCBI-GeneID:
136511941
NCBI-ProteinID:
XP_066362055
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Position
16:98214195..98220003
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AA seq
683 aa
AA seq
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MARSTSLSEAEAGISCFTSSLPGFRGVLKHRYADFIVHEVARDGALVQLTSFDLPTECVD
VNEEDKAAPSAEADHSQALESFRSLCGDADCNALKSLLERVSAGGDSDVSPVILSPDADK
AHRSDVHNFFKKTFKFLVTDTVEHSDGVQRCIRVRLGSGAGGGRGGGGRGRGRKRKNMGS
SDWRDDRPFDSRGSSNWSDNAGKFLRFHLYKENKDTQEALGVIGKMLGLQPRSFGFAGTK
DKRAVTTQQVTVFKVQASRLAALNNRLFGIKVGNFCYVKEGLVLGQLTGNRFAITLRGVT
AESEDMIKNAVDGLGKNGFINYYGLQRFGSGSVPTHLVGAALLRGEWKAAVNLILDPREG
ERDDINEVRKHYKEHGDIDMALRNFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMM
YVHSYQSYLWNHAASMRVEKYGISQVVEGDLVYNKECPPEESTSVNILETDDGHTNSIEI
DLCSEAQPEESIQSVKIVDSGDLLKGIYTFDDVVLPLPGSQALFPGNEVAEIYHEMARKD
GISLTENAHGVKEFSITSMKGGYRRVFQRPIGFEWELMTYTDDSSSLAETDLDVLSRTKP
KEANELISNQEHQDKLEKAPDSSVPTNENSSQENKLIGSPDTLSKKLALKLAFILPASCY
ATMAIRELLKTSTSVAYQKTLSC
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctcgacctcactctccgaggcggaggcgggcatctcctgcttcacctcctcc
cttcccggattccgcggcgtcctcaagcaccgctatgctgatttcatcgtccacgaggtt
gcccgcgacggcgctctcgtccagctcacctcgttcgatctccccaccgagtgcgttgat
gtgaatgaggaggataaggcggcgccgtcggctgaagcggaccactcgcaggcccttgag
tcgttccgttcactttgcggcgatgccgactgcaacgcattgaagagtctcctggagagg
gtgtcggctggtggtgacagtgatgtctcgcctgtcattctctcgcctgatgctgacaag
gctcaccgatcggacgtgcataacttctttaagaagaccttcaagttcctggtcacggac
acggtggaacacagtgatggggtccagaggtgcatcagggtgcggttggggtcaggagca
ggtggtggaaggggtggtggcggccgcgggagaggaaggaaacggaagaacatgggtagt
tctgattggagagatgacaggccatttgatagtagagggtcgagtaattggtcagataat
gctgggaagttcctgaggtttcacctgtacaaagagaacaaggacacccaagaagcatta
ggagtaataggaaaaatgctaggacttcagccacgctcatttgggtttgcagggacaaag
gataagcgtgctgttactacacagcaggtaactgttttcaaggtgcaagccagtagattg
gctgctcttaataatcggctgtttgggattaaagttggaaacttctgttatgtgaaggag
ggacttgttcttggtcagctcacaggaaatcgatttgcaattactctgaggggtgttact
gcagaatctgaagacatgataaaaaatgccgtagatggcttaggaaagaatggatttatc
aactactatggtttgcagcgttttggaagtggttcagtaccaacacaccttgttggggct
gctttgcttagaggagagtggaaggctgctgtaaacttgattcttgatccaagggaagga
gagcgtgatgacattaatgaggtgcgcaaacattacaaggaacatggtgacattgatatg
gcactgaggaacttccctcggcacctcgtagctgagagggcaatacttcaatgtctgaag
aaatgccctggtaaccatctgcaagcacttaagggtataccaagaacacttagaatgatg
tacgtacatagttaccaaagttacctgtggaatcatgctgccagtatgagagtggaaaag
tatggcatttcacaggttgtagaaggtgacttagtgtataacaaagaatgccctccagaa
gaatcgacttccgtaaacattctggaaactgatgatggccatacaaattcaattgaaatt
gatctatgttctgaagcacaaccagaagaaagcatccagtctgtgaagatagttgattct
ggagatttattgaaggggatatacacatttgatgatgttgtcctacctttgcctggttca
caagcattgtttcccgggaatgaagttgctgagatttaccatgaaatggctagaaaggat
ggcattagcttgacggagaatgctcatggtgtcaaagagttttcaattacaagcatgaaa
ggtggttaccgtcgagtgttccagcggcctattggtttcgagtgggaactcatgacttac
acggatgacagttcatctttagcagaaactgatttagatgttctgtccagaaccaagcct
aaagaagcaaatgagcttatttctaaccaggagcatcaggataagttggaaaaggctcct
gattcctctgtaccaactaatgagaatagctcgcaagaaaataagcttattggcagccca
gatacactatcaaagaaattggccttaaaattagcatttattttaccagcatcatgttat
gcgacaatggctatccgggagcttctgaagacttccacatcggttgcatatcagaaaaca
ctcagctgctaa
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