Miscanthus floridulus: 136511974
Help
Entry
136511974 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136511974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136511974
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
136511974
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
HECT type E3
136511974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
136511974
NCBI-ProteinID:
XP_066362074
LinkDB
All DBs
Position
16:31972435..31992179
Genome browser
AA seq
1029 aa
AA seq
DB search
MFFSGDSSARRRVDLGGRSNKERDRKVLLEQTREERRRRQGLRLQNSSATNIQKFFRGKK
ALELAHSEVRKNFCSTFGEHCERIDWNNFGTNSDFLRQLLFFFNANEDNDIAILCQVCNL
LLQYVKQGGDVVTLFTGVNGSSLQPLVAHRVKKIALICVQAVYQKRHDWGSQLLTTPGST
SVPSVSLLETVGCLINPKFPWSCKVVGYLQQRKIYCLFRGIIVSVPHKVRNSGHFDSASV
LELEQVLMLVASHVGHHPCCCLKVDPRWSFSSQLLSIPFLWHRLPHLKKVFSVNGLSKYY
IHQIACILPSLADVLPNDISANHPGYACVLANVLEAATWILSDAKVASDSAADITAVSTS
LLDTLPAVTTPTERADDDDEMPMDVDVKINLDVDLERQITAAIDSKLLQHLVNALFRGTL
STNDSDLSGPSDAEVDAVGSICAFLHVTFNTFPLERIMTVLAYRTEIVPALWNFIKRCHA
NRRWPFFSKFASSLPADAPGWLLPMSVFCPIYKHMLKIIDNGEFYEQEKPLSLKDLKSLV
PILKQALWQLLWVIPSSSTQKVSPDTSGLKKLSVENVKTRARAGLSELLTQLQDWNSRLP
FTSASDFYSQEATSENFVSQAILGNTRASEIIKLAPFLAPFTSRVKIFTSQLTSSRQSTS
HSALTRQRFKIRRNRLLEDAFDQLSLLSEEDLKGPIRVSFINEHGEEEAGIDGGGIFKDF
MENITRAAFDVQYGLFKETADHLLYPNPGSGLVHELHLQYFHFLGSLLGKAMYEGILVDL
PFATFFLSKLKQKYNFLNDLPSLDPELYRHLLFLKHYNGDISELELYFVIVNNEYGEQCE
VELVPGGRDMRVTNDNVITFIHLVANHRLNYQIRAQSTHFLRGFQQLIPKDWIDMFNEHE
IQVLISGSLESLDIDDLRSNTNYSAGYHPDHELIEMFWEVLKSLSSDNQKKFLKFVTGCS
RGPLLGFQYLEPKFCIQRAGVPGLEEHADRLPTSATCMNLLKLPPYKSKEQIQTKLLYAI
NSEAGFDLS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcgggtgactcgtcggcgcggcggcgggtcgatctcggcgggcggagcaac
aaggagcgggaccgcaaggtgctgctcgagcagacgcgcgaggagcggcgccggcgccag
ggcctccgcctccagaacagctccgccacgaatatccagaaattcttcagagggaagaag
gctttggaattggcacactcagaggttcggaagaatttttgctcaacttttggggagcat
tgtgagaggatagattggaacaacttcggcactaattctgactttcttcgacaattactg
tttttcttcaacgcaaatgaagacaatgacatagctatactttgtcaagtctgcaacttg
ctgctgcaatatgttaaacaaggtggagatgttgtaactctctttactggtgtgaatggc
tcctcactgcaacctctcgttgctcacagagtaaaaaaaattgccctcatctgcgtgcaa
gcagtctatcaaaagaggcatgattggggcagccaacttttgacaacacctggaagcaca
tcagtgccttctgtctcattactggaaactgtaggttgcttgataaatccaaaatttcct
tggagctgcaaagtagttggttatcttcagcagagaaagatctattgcttattccgtggc
attatcgtatctgtaccgcataaggtcagaaattctgggcattttgatagtgcatctgtg
ctggagctggagcaagttctcatgcttgttgcttcacatgttggccatcatccctgttgt
tgtctgaaagtggatccaagatggagtttctcgtctcagcttctgtccatcccttttcta
tggcatcgtttaccacacctcaagaaggttttctcagttaacgggctcagcaaatattat
atccatcaaatagcttgcattttgcccagtcttgctgatgtccttccaaacgatatatca
gctaatcatccaggatatgcgtgtgtccttgcaaatgttcttgaagctgcgacctggatt
ttgtctgatgcaaaggttgcttctgattcagcggctgacatcactgctgtttctacctcg
ttgttggatacgttgccagcagtcacaacacctactgaaagagcggatgacgatgatgag
atgcccatggatgtcgatgttaaaattaatcttgatgttgatttggaaagacagataact
gcagcaattgattcaaagctacttcaacatttggtgaatgccctcttcagaggtacatta
agcacaaatgattctgatctttctggaccatcagatgctgaagtggatgctgtaggatct
atttgtgcttttcttcatgtcacattcaatacattccctctagagcgaattatgactgta
ctggcctaccggactgaaattgttcctgcactatggaactttataaaacggtgccatgca
aaccgaagatggccatttttttcgaagtttgcatcttcattacctgctgatgctcctggt
tggctccttcccatgtctgtattctgtcccatatacaagcacatgttgaagatcattgat
aatggggagttctatgaacaggagaaacccctttcccttaaagatttgaagtccttggtt
cccattttaaagcaggcattatggcaacttctgtgggttattccatcctcttctactcag
aaagtgtcacccgacacttcaggccttaaaaagttgtcagtggagaatgtcaagaccaga
gctagggctgggttgtctgaactactcacacagttgcaagattggaacagccgactccca
ttcacttctgcaagtgatttctattctcaagaagcaacaagcgaaaattttgtgtctcag
gcgatacttggtaatactcgagcatcagagatcataaagcttgctccttttttggctccg
tttaccagtcgagtcaaaatattcacttcccaattaacgagttctagacaatcaacatcg
cattctgcattgacaagacaacggttcaaaataagaagaaatcgacttctggaagatgct
tttgatcagctaagtttgctttctgaagaagatctcaaaggaccgattcgagtttcattt
attaatgagcatggtgaggaagaggctggaatcgatggcggtgggattttcaaggatttc
atggaaaatattactcgagcggcttttgatgtgcagtacggtctctttaaggagacggct
gatcatcttttgtacccaaatccaggatcaggattggttcatgaactacacctgcaatat
ttccattttcttggaagtctacttgggaaggcaatgtatgaaggcatacttgttgacttg
ccgtttgcaacgttcttcttgagcaagttgaaacaaaagtacaattttttaaatgatctt
ccttcattggatccagaattgtatcggcatcttctatttttaaagcactacaatggtgat
atctcagagttggaactgtattttgttattgtaaataatgaatatggtgaacaatgtgaa
gtagaacttgtccctggtgggagggacatgcgtgttacaaatgataatgttattactttt
atccatcttgtcgccaatcatcggttaaactaccagatccgtgcacaaagtacacacttt
ttgagaggttttcaacagcttataccaaaagactggattgatatgttcaatgaacatgaa
attcaggttcttatatctggctctttagaaagcttggatatcgatgacttgcggtcgaac
accaactattctgcaggatatcatccggatcatgagcttattgagatgttttgggaagtc
ttgaagagcttaagttcagacaaccagaaaaaatttctcaagtttgtgactggatgttct
cgtggtcccctccttggatttcagtatcttgaaccaaaattttgcattcagagagctggt
gttccaggacttgaggagcatgcagaccgcttgcctacatcagctacctgcatgaacctt
ctgaagcttcccccctataaaagcaaggagcagatacaaaccaaactgttgtacgcgata
aattcagaagctggttttgatctaagttga
DBGET
integrated database retrieval system
