Miscanthus floridulus: 136512018
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Entry
136512018 CDS
T10264
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03420
Nucleotide excision repair
mflo04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
136512018
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
136512018
TCR (transcription coupled repair) factors
Cul4-CSA complex
136512018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136512018
NCBI-ProteinID:
XP_066362125
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All DBs
Position
16:complement(117135215..117143485)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATIELFRPHNETQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCVKPTIVVL
YQDNKDVRHVKTYEVALKDKDFVEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYC
NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIEYLGE
TSIASSISYLDNGVVYVGSQFGDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDL
DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV
SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL
VDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLDLNP
IGENPQYSSLAAVGMWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA
LGDGNLFSFLLNARTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSRTLAFCSFKCNQSVEESETHLIRLLDHQTFESLCVYPLDQYEYGCSIISCSFADD
NNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGSVYSLNAFNGKLLAAI
NQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES
AIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERARLEVVGEYHL
GEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTINGVIGIIASLPHDQYVFLEKLQSTLVKY
IKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtggaactacgtcgtcacggcgcacaagcccaccagcgtcagccactcctgc
gtcggcaacttcaccagccccaaccagctcaatctcattatcgcgaaatgtacccggatc
gagatccatttgcttacccctcagggccttcagccgatgcttgacgtacctatatatgga
agaattgcaacgattgagctcttccggcctcataatgagactcaggattttcttttcatt
gctacggagaggtacaaattctgtgttctgcaatgggacgcagaaaaatcagagctaatt
accagagccatgggtgatgtttctgatcgcattggccgccctactgacaatggacagatt
ggaatcatcgaccctgactgcagactcattggccttcatctctatgatggcttatttaag
gttataccatttgacaacaaagggcagctgaaagaagctttcaatatcagactggaagaa
cttcaagtactggacatcaaatttctgcatggttgtgttaaacctactattgttgtcctc
taccaggataataaagacgtgaggcatgttaagacttatgaagttgcactgaaggacaaa
gattttgttgagggtccttggtcccagaataatgtagacaatggtgctggtttgttaata
ccagtaccagctccacttggtggtgtgataataattggcgaggagcaaatagtttactgc
aatgccaattctacatttaaagcaataccaataaaacaatccatcattagagcttatgga
cgggttgacccagatggttctcgatatttacttggtgataatactggaattctgcattta
cttgtccttacccatgaacgagaaagggttactggtttgaaaattgaataccttggagag
acttcgattgcatcatcgatttcatatctcgataatggcgttgtttatgttggttcacag
tttggcgattcacagctggtgaagctgaacctccaagctgatgcaagcggttcatttgtt
gaaattcttgaacggtatgttaatcttggaccgattgtggacttttgcgtggttgacctt
gataggcagggtcaaggtcaggtggtcacttgttctggggcatttaaagatggttccctt
cgggtggttcggaatggtatagggattaatgagcaggcttcggtagaactccaaggcata
aagggattatggtcattgaaatcttcgttcaatgatccatatgacatgtaccttgtcgtg
agctttataagtgagacacgattcttggcgatgaacatggaagatgaactagaagagact
gagatagagggatttgatgcacaaactcaaaccctgttttgccagaatgcgatcaatgat
cttcttatacaggttactgctaattctgttcggttagtcagttgtacctctcgggagcta
gtggatcaatggaatgcaccagcaggattctcagtcaatgttgcttcagctaatgccagt
caggttctgttggcaactggtggtggccatcttgtttacctggaaattagggatgctaaa
cttgttgaagtgaagcatgcgcagctagaacatgagatttcttgtcttgatttgaaccca
attggggagaatccacagtatagttccctagctgctgttgggatgtggacagatataagt
gttagaatattttcacttccagatcttgaattaataaggaaggaaaatttgggtggagaa
attgttcctcggtctgttctgctgtgcaccttggagggggtttcgtatttgctttgtgct
cttggggatggtaacctgttcagttttctgctgaatgcacgtacaggtgaactgactgat
agaaagaaggttaccctcgggacccaacccatcagccttcgtaccttctcatcaaagggt
accacccacgtgtttgcttcgtcagataggccaactgtcatctatagcagcaataagaag
cttctctatagcaatgtcaatttgaaagaggttaatcatatgtgccctttcaatacagcc
gcttttccagacagtcttgcaattgctaaagagggtgagctttcaattggaactatcgat
gatatccagaagcttcatatccgcacaatcccccttaatgaacaagcacgccgcatttgc
caccaggagcaatcaaggacactagcattttgcagtttcaagtgcaaccaaagtgtggag
gaaagtgagactcatttaatacgtctgctagatcatcagacttttgagtccctgtgtgta
tatcctctagatcaatatgaatatggctgctccatcattagctgttcctttgcggatgat
aataatgtttattactgtgtgggaactgcatatgttatacctgaagaaaatgaaccaaca
aagggccggatccttgtatttgcagttgaagatggaagcttgcaattaattgtggagaaa
gaaaccaaaggatcagtttattcgctgaatgcatttaatgggaaattattggctgctatc
aaccagaagattcaattatataagtggatgtcacgcgaggatggttcacatgagctgcaa
tctgagtgtggccaccatgggcacatacttgccttgtatactcaaacgcgtggtgacttc
attgtggttggcgatctgatgaaatcaatatccttgctggtgtataagcatgaagaaagc
gcgattgaagagcgtgctagggattacaatgcaaactggatgactgctgttgagatgctt
gatgatgaagtctatgttggggcggagaatggctataatctattcaccgtgcgcaagaac
agcgatgcagccacagatgatgaaagggccaggcttgaggtcgtcggggagtaccatctt
ggggagtttgtgaacagattccgccatggttcactcgtgatgcgtcttccagactcagag
atagggcagattcctacggtcatctttggcacaataaacggggtaattggcattattgcc
tccctcccgcatgaccaatacgtcttcctggagaagctccagtcgactcttgtgaagtac
ataaagggcgtcggaaacctgagccatgagcaatggcggtcgttccataacgacaagaag
acagcggaggctcggaacttccttgacggtgacctgatcgagtcgttccttgaccttagc
cggagcaagatggaggaggtgtccaaggccatgggcgtccccgtggaggagctgtccaag
agggtggaagagctgacgaggcttcactag
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