Miscanthus floridulus: 136512182
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Entry
136512182 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
136512182
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
136512182
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
136512182
NCBI-ProteinID:
XP_066362260
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Position
16:complement(120308353..120311612)
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AA seq
677 aa
AA seq
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MQVEVVVDNGMVQVSLSAPQGHITAVRYNGDDQNLLQYNASQANSGGYWDVVWNYPGSNQ
PKGMMDMLDGTEFQVVSSDEEQVELSFRSSYNPSSPPNSLRLNVDKRFVMLRGSFGFYCY
AIFEHPLERPALNISVARLAFKLNEDRFRYMAISDDIQRYMPSAADRDPPRGVPLDYKEA
VLLVDPVEPEFKGEVDDKYQYAMDNKDNTVHGWIAAGDSSRGGVGFWVITPSNEFKNGGP
LKRELTSHTGPTSLSVFLGSHYAGKDMIINFDEGEYWKKVLGPVFVYLNSGHHPLHAAGS
NDDDVNNHLWEDAKAQAQAEVSKWPYSFPGSPDFAKAGERGSVTGRLWVRDRSYSNDDKQ
QAAAMQQPEPAAMAYVGLASPGQPGSWATESKGYQFWTRATSDGSFSIANVREGTYNLYA
WVPGILGDYMHTSPVTVTIAAPARNATVVNLGDLVFEPPRSGPTLWEIGVPDRTAAEFYV
PDADPKYASRLFLTKDRYRQYGLWERYAALYPVENGDLVFTVGRSNHSRDWFFAHVTRRI
VVGNNETTRTNIVPTTWQIRFHLDRVVADGTYTLRIALAASHMSNLKVQVNSGGGSVAGA
GADAGGGGEVVALNLMGDNNAIARHGIRGTQWSLDMDVKAHLLNQGHNTIYINQTTPYQF
AGVMYDYIRLEGPSISI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggaggtggtcgtggacaatggcatggtgcaggtgtcgctgtccgcgccgcag
ggccacatcaccgccgtccgctacaacggcgacgaccaaaacctgctgcagtacaacgcc
agccaagcaaactcaggagggtactgggatgtggtttggaactaccctggctcaaatcaa
ccaaaaggaatgatggatatgttggatggtacagagttccaggttgtatcctcggatgaa
gagcaagtcgagctttctttcaggagctcatacaatccttcatcacctccaaacagcctc
cggctaaacgtagacaagaggtttgtgatgctgcgaggcagcttcgggttctactgctac
gccatctttgagcatcccctggagcgcccagcgctcaacatctccgtggctcgcctcgcc
ttcaagctcaacgaggacaggttccgttacatggccatctccgacgacattcagagatac
atgccgagtgcggcggacagggatccaccccgcggcgtgccgctggactacaaggaggcc
gtcctgctggtggaccccgtggaaccggagttcaaaggcgaggtggacgacaagtaccag
tacgcgatggacaacaaggacaacacggtgcacggatggatcgccgccggcgattccagc
aggggcggcgtcggcttctgggtcatcactcccagcaacgagttcaagaacggcgggccg
ctcaagcgggagctcacctcccacaccggccccacctccctctcggtgtttctagggtcg
cattacgcaggcaaggacatgattatcaattttgatgagggtgagtactggaagaaagtg
ctgggccccgtcttcgtctacctcaactccgggcaccacccgctgcacgccgccggctcc
aacgacgacgatgtcaacaatcatctctgggaggacgccaaggcgcaggcgcaggcggag
gtgagcaaatggccctacagcttccctgggtcgccggactttgcaaaggcaggcgagaga
ggttccgtcacagggaggctctgggtcagggacaggtcctactccaacgacgacaagcag
caggcagcagcgatgcagcagcctgaacctgctgcgatggcttatgtcggcctcgcctca
cctggccaacctggctcctgggccacagagagcaaggggtatcagttctggacgagggcc
acatcggacggcagcttcagcatcgccaatgtccgtgaaggaacgtacaatctgtacgca
tgggttcccgggatccttggagactacatgcatacctcgcctgtaactgtaaccatagcg
gcgccagcaagaaatgccaccgtcgtcaacctcggtgacctggtgttcgagcctccgaga
tcaggccccacgctgtgggagatcggcgtcccggaccggacggcggcggagttctacgtc
cccgacgccgaccccaagtacgccagcaggctgtttctcaccaaggacaggtaccggcag
tacggcctgtgggagaggtacgccgccctgtaccctgtggaaaatggcgacctcgtgttc
acggtcggcaggagcaaccactccagggactggttctttgctcatgtcacaagaagaatc
gtcgtgggcaacaatgagacgacgaggacgaacatagtgccaacgacatggcagatacgt
ttccatctggacagagtggtggctgatggcacctacacgctgcgcattgctctcgcagct
tctcacatgtccaacctcaaggtgcaagtgaacagcggcggcggatccgtagccggagcc
ggcgctgacgccggaggtggaggagaggtggtagccctgaatctgatgggcgacaacaac
gccatcgcgcggcacggcatacgcggcacgcagtggagcttggacatggatgtcaaggcc
cacctgctcaaccaagggcacaacaccatctacatcaaccagacaactccctaccagttt
gccggggtcatgtacgactacattcgccttgaaggcccttccatttccatatag
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