Miscanthus floridulus: 136512339
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Entry
136512339 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136512339
Enzymes [BR:
mflo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
136512339
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136512339
Prokaryotic type
136512339
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
136512339
NCBI-ProteinID:
XP_066362401
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All DBs
Position
16:complement(8092969..8097468)
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AA seq
500 aa
AA seq
DB search
MPPRAGAMAAAARAALLPPSSSSPSPLLRLPHRFLSLTATPYPLYYDLIVHRPAEPNPPK
SSASDAAGADRQPQPASDEQPLDRAKRRYLRKRRSRLLPDPDATTTTKPSSSSSEFVELR
PEVVDFPRLHAREEALYFHDTFAMPWEKDKHYRMLYRLEKKYFPHQSLDNAFVSADAAPA
SDADRCLVFFDDEKKEDEGEERVVSKKGGDSNDKGEVLERKVEDFFRSLKKGPGQAGNKA
KRPGAEPQQVKREVPREEERPQPYLVTRTTELPPRWDGPAGTVVLIDKPKGWTSFTVCGK
LRRLVKVQKVGHAGTLDPMATGLLIVCVGKATKIVDSYQGMVKGYSGVFRLGEATSTWDA
DSPIIQREPWEHIKDEDIRKAAASFKGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSP
RRISIYQFDIERSLEDRQNLIFRVTCSKGTYIRSLCADLGKALGSCAHLTALRRDSIGEY
SVNDAWNFNELEQQITKGYL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcgagcaggagccatggcggcggcggcgagggcggcgctgctgcccccctcc
tcctcctccccgtcgccgctgctccgcctcccgcaccgcttcctctcgctcaccgcgact
ccctaccctctctactacgacctcatcgtgcaccgccccgcggaacccaatccccccaaa
tcctccgcctccgacgccgccggggccgaccgccagccgcagccagcatccgacgagcag
ccgctggaccgcgccaagcgccggtacctccgcaagcgccgcagccgcctcctccccgac
cctgacgccaccaccaccaccaagccctcctcctcgtcgtcggaattcgtcgagctccgg
ccggaggtggtggacttcccgcgcctgcacgcgcgcgaggaggcgctctacttccacgac
accttcgctatgccgtgggagaaggacaagcactaccgtatgctctaccgcctggagaag
aagtacttcccccaccagtcgctcgacaatgcattcgtctctgctgacgctgccccggcc
tccgacgccgataggtgcctcgtcttcttcgacgacgagaagaaggaagatgagggagag
gagcgggtggtcagtaagaagggcggcgacagcaacgacaaaggggaggtgctggagagg
aaggtggaagacttcttcaggtctctgaagaagggccccggccaagccggcaacaaggcc
aagagaccgggagcggagccgcagcaggtgaagcgcgaggtgcccagggaggaggagcgt
ccgcagccgtacctcgtcaccaggaccacggagctgccgccgaggtgggacggcccggcc
gggaccgtcgtgctcatcgacaagcccaaaggatggacttcgtttactgtttgtggaaag
ttgaggcgcttggtgaaagtacaaaaggttggacatgctggaactctggaccccatggca
actggattgttgattgtttgtgtaggaaaagcaaccaaaattgttgatagctaccaagga
atggttaaaggctatagcggtgttttccgacttggagaagccacatcaacctgggatgca
gattcaccaattatccagagggaaccatgggaacacatcaaagatgaagatattagaaag
gcagcagcatcattcaagggtgagatatggcaagttcctccaatgttttctgccattaag
gttggtggtgaaaagatgtatgacaaagcacggaggggtgaaacagtagagctttcacca
agacgtatatcaatataccaatttgatattgagcgcagtttggaagatagacagaatttg
atatttcgtgttacttgctcaaaaggaacatacattcggtccctatgtgcggacttgggt
aaagcacttggaagctgtgctcatttaactgccttgcggagagactcaataggtgaatac
tcggtcaatgatgcttggaacttcaatgagcttgagcaacaaatcaccaagggatattta
tga
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