Miscanthus floridulus: 136512411
Help
Entry
136512411 CDS
T10264
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136512411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136512411
Spliceosome [BR:
mflo03041
]
Common components
Common spliceosomal components
SR proteins
136512411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC
RRM_occluded
RRM_3
RNA_bind
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
136512411
NCBI-ProteinID:
XP_066362472
LinkDB
All DBs
Position
16:2498021..2504641
Genome browser
AA seq
393 aa
AA seq
DB search
MGFKIKYKQQLRDTVASGGGGGGRSSGATPPTSPPQEPAPSPRRSPSPPDAESKIPRRKD
HCDPYDHSGQHGSTTKLYVGNMSRYTRERDLEAAFGRYGRLLTVCLQGRNYGFVVFYDPK
DADAARNGLDGQEICGSHITVQFAREHKMTRYDTRYIHDDQNDRQDGNSKLFVSNISPRT
QEHDIKDLFSKYGRVRKANLKENNGFVEFCDPQDADDARCELNGQKINGNRIGVKFATGV
PRGPVDSAQILCCNCGAGGHFSGDCKAGDWKDRCYRCGEKGHLKRNCRNSPKGIRYRRRR
SHSRSKSPVHGMGQSWRFRSRSRSYSSQPPSPRRGNRYTGGEELTSRSPCYSHNPRSRSS
PPPPREPAKRSGLFHDALPRRGDNQNPGPNYQR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaagatcaaatacaagcagcagctgcgggacaccgtggcaagcggcggcggc
ggcggtggcagaagcagcggagctacaccgccgacatcgccgccacaagaacccgctccc
tcgccgcggcgttcaccttcgccgcctgatgccgagagtaaaatacctcgacgcaaggac
cactgcgatccctatgatcattctggtcaacatggaagtacaaccaagttgtatgtggga
aacatgtctcggtatactcgggaacgagatcttgaggctgcttttggcagatacggaaga
ttgctgacggtgtgtctgcaggggaggaattatggctttgttgtgttttatgatcccaag
gatgcagatgctgcaagaaatggcctagatggccaagaaatttgtgggagccacatcact
gttcaatttgcaagagagcacaaaatgactcgatatgacacgcgctatattcatgatgat
caaaatgatcgacaagatggtaactccaagttgttcgtgagcaacatttctccacgtacc
caggaacatgatattaaggacctattcagcaaatatgggagagtgcgcaaagcgaatctt
aaggagaacaatggttttgttgagttttgtgatccccaggatgcagatgatgcaaggtgt
gaacttaacggacaaaaaattaatgggaaccgcatcggtgttaagtttgcaacaggggtt
ccacgtggtccagtagattctgctcaaatcctctgctgtaactgtggggcaggggggcac
ttttctggtgattgcaaggctggtgactggaaagataggtgctaccggtgtggagaaaag
ggccatctcaaaagaaactgccggaacagtcctaagggtatcagatacaggcgaaggaga
agccattcgaggtccaagtctcctgttcatggaatgggccaaagctggagattcaggagt
cgcagtaggagttacagcagtcagccaccatctccaagaaggggtaaccgatatactggt
ggtgaagaattgacatcaagaagcccctgttacagccacaaccccaggagcaggagcagt
cccccaccaccaagggagccagctaaacgcagtggtttattccatgatgcactccccagg
agaggtgacaaccagaatcctggccccaattatcagcgatga
DBGET
integrated database retrieval system
