KEGG   Miscanthus floridulus: 136512573
Entry
136512573         CDS       T10264                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
mflo  Miscanthus floridulus
Pathway
mflo03420  Nucleotide excision repair
mflo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    136512573
  09124 Replication and repair
   03420 Nucleotide excision repair
    136512573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mflo04121]
    136512573
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136512573
Ubiquitin system [BR:mflo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     136512573
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      136512573
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      136512573
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 136512573
NCBI-ProteinID: XP_066362636
LinkDB
Position
16:119316262..119324535
AA seq 1089 aa
MSVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATIELFRPHNETQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCVKPTIVVL
YQDNKDVRHVKTYEVALKDKDFVEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYC
NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIEYLGE
TSIASSISYLDNGVVYVGSQFGDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDL
DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV
SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL
VDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLDLNP
IGENPQYSSLAAVGMWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA
LGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSRTLAFCSFKCNQSVEESETHLIRLLDHQTFESLCVYPLDQYEYGCSIISCSFADD
NNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGSVYSLNAFNGKLLAAI
NQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES
AIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERARLEVVGEYHL
GEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTINGVIGIIASLPHDQYVFLEKLQSTLVKY
IKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGAPVEELSK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagcgtgtggaactacgtcgtcacggcgcacaagcccaccagcgtcagccactcctgc
gtcggcaacttcaccagccccaaccagctcaatctcattatcgcgaaatgtacccggatc
gagatccatttgcttacccctcagggccttcagccgatgcttgacgtacctatatatgga
agaattgcaacgattgagctcttccggcctcataatgagactcaggattttcttttcatt
gctacggagaggtacaaattctgtgttctgcaatgggacgcagaaaaatcagagctaatt
accagagccatgggtgatgtttctgatcgcattggccgccctactgacaatggacagatt
ggaatcatcgaccctgactgcagactcattggccttcatctctatgatggcttatttaag
gttataccatttgacaacaaagggcagctgaaagaagctttcaatatcagactggaagaa
cttcaagtactggacatcaaatttctgcatggttgtgttaaacctactattgttgtcctc
taccaggataataaagacgtgaggcatgttaagacttatgaagttgcactgaaggacaaa
gattttgttgagggtccttggtcccagaataatgtagacaatggtgctggtttgttaata
ccagtaccagctccacttggtggtgtgataataattggcgaggagcaaatagtttactgc
aatgccaattctacatttaaagcaataccaataaaacaatccatcattagagcttatgga
cgggttgacccagatggttctcgatatttacttggtgataatactggaattctgcattta
cttgtccttacccatgaacgagaaagggttactggtttgaaaattgaataccttggagag
acttcgattgcatcatcgatttcatatctcgataatggcgttgtttatgttggttcacag
tttggcgattcacagctggtgaagctgaacctccaagctgatgcaagcggttcatttgtt
gaaattcttgaacggtatgttaatcttggaccgattgtggacttttgcgtggttgacctt
gataggcagggtcaaggtcaggtggtcacttgttctggggcatttaaagatggttccctt
cgggtggttcggaatggtatagggattaatgagcaggcttcagtagaactccaaggcata
aagggattatggtcattgaaatcttcgttcaatgatccatatgacatgtaccttgtcgtg
agctttataagtgagacacgattcttggcgatgaacatggaagatgaactagaagagact
gagatagagggatttgatgcacaaactcaaaccctgttttgccagaatgcgatcaatgat
cttcttatacaggttactgctaattctgttcggttagtcagttgtacctcccgggagcta
gtggatcaatggaatgcaccagcaggattctcagtcaatgttgcttcagctaatgccagt
caggttctgttggcaactggtggtggccatcttgtttacctggaaattagggatgctaaa
cttgttgaagtgaagcatgcgcagctagaacatgagatttcttgtcttgatttgaaccca
attggggagaatccacagtatagttccctagctgctgttgggatgtggacagatataagt
gttagaatattttcacttccagatcttgaattaataaggaaggaaaatttgggtggagaa
attgttcctcggtctgttctgctgtgcaccttggagggggtttcgtatttgctttgtgct
cttggggatggtaacctgttcagttttctgctgaatgcaagtacaggtgaactgactgat
agaaagaaggttaccctcgggacccaacccatcagccttcgtaccttctcatcaaagggt
accacccacgtgtttgcttcgtcagataggccaactgtcatctatagcagcaataagaag
cttctctatagcaatgtcaatttgaaagaggttaatcatatgtgccctttcaatacagcc
gcttttccagacagtcttgcaattgctaaagagggtgagctttcaattggaactatcgat
gatatccagaagcttcatatccgcacaatcccccttaatgaacaagcacgccgcatttgc
caccaggagcaatcaaggacactagcattttgcagtttcaagtgcaaccaaagtgtggag
gaaagtgagactcatttaatacgtctgctagatcatcagacttttgagtccctgtgtgta
tatcctctagatcaatatgaatatggctgctccatcattagctgttcctttgcggatgat
aataatgtttattactgtgtgggaactgcatatgttatacctgaagaaaatgaaccaaca
aagggccggatccttgtatttgcagttgaagatggaagcttgcaattaattgtggagaaa
gaaaccaaaggatcagtttattcgctgaatgcatttaatgggaaattattggctgctatc
aaccagaagattcaattatataagtggatgtcacgcgaggatggttcacatgagctgcaa
tctgagtgtggccaccatgggcacatacttgccttgtatactcaaacgcgtggtgacttc
attgtggttggcgatctgatgaaatcaatatccttgctggtgtataagcatgaagaaagc
gcgattgaagagcgtgctagggattacaatgcaaactggatgactgctgttgagatgctt
gatgatgaagtctatgttggggcggagaatggctataacctattcaccgtgcgcaagaac
agcgatgcagccacagatgatgaaagggccaggcttgaggtcgtcggggagtaccatctt
ggggagtttgtgaacagattccgccatggttcactcgtgatgcgtcttccagactcagag
atagggcagattcctacggtcatctttggcacaataaacggggtaattggcattattgcc
tccctcccgcatgaccaatacgtcttcctggagaagctccagtcgactcttgtgaagtac
ataaagggcgtcggaaacctgagccatgagcaatggcggtcgttccataacgacaagaag
acagcggaggctcggaacttccttgacggtgacctgatcgagtcgttccttgaccttagc
cggagcaagatggaggaggtgtccaaggcgatgggcgcccccgtggaggagctgtccaag
agggtggaagagctgacgaggcttcactag

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