Miscanthus floridulus: 136512668
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Entry
136512668 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136512668
Enzymes [BR:
mflo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
136512668
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136512668
Prokaryotic type
136512668
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
136512668
NCBI-ProteinID:
XP_066362746
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All DBs
Position
16:complement(7977559..7982451)
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AA seq
516 aa
AA seq
DB search
MPPRAGAMAAAARAALLPSSSSSPSPLLRLPHRFLSLTATPYPLYYDLIVHRPAEPNPPK
SSASDAAGAGRQPQPASDEQPLDRAKRRYLRKRRSRLLPDPDATTTTRPSSSSSEFVELR
PEVVDFPRLHAREEALYFHDTFAMPWEKDKHYRMLYRLEKKYFPHQSLDNAFVSADAAPA
SDADRSLVFFDDQKKEDKGEERVVSKKGGDSDDKGEVLERKVEDFFRSLKKGPGQADTKT
KRPGKEPQQVKREVLKQEERPQPYLVTRTTELPPRWDGPAGTIVLIDKPKGWTSFTVCGK
LRRLVKVQKVGHAGTLDPMATGLLIVCVGKATKIVDSYQGMVKGYSGVFRLGEATSTWDA
DSPIIQREPWEHIKDEDIRKAAASFKGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSP
RRISIYQFDIERSLEDRQNLIFRVTCSKGTYVRSLCADLGKALGSCAHLTALRRDSIGEY
SVNDAWNFDELEQQITKGLGHTRSCVLLPSKKGMQL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcgtgcgggagccatggcggcggcggcgagggcggcgctgctgccctcctcc
tcctcctccccgtctccgctgctccgcctcccgcaccgcttcctctcgctcaccgcgact
ccctaccctctctactacgacctcatcgtgcaccgccccgcggaacccaatccccccaaa
tcctccgcctccgacgccgccggggccggccgccagccgcagccagcatccgacgagcag
ccgctcgaccgcgccaagcgccggtacctccgcaagcgccgcagccgcctcctccccgac
cctgacgccaccaccaccaccaggccctcctcctcgtcgtcggaattcgtcgagctccgg
ccggaggtggtggacttcccgcgcctgcacgcgcgcgaggaagcgctctacttccacgac
accttcgctatgccgtgggagaaggacaagcactaccgtatgctctaccgcctggagaag
aagtacttcccccaccagtcgctcgacaatgcattcgtctctgctgacgctgccccggcc
tccgacgccgataggagcctcgtcttcttcgacgaccagaagaaggaagataagggagag
gagcgggtggtcagtaagaagggcggcgacagcgacgacaaaggggaggtgctggagagg
aaggtggaggacttcttcaggtctctgaagaagggccccggccaagccgacaccaagacc
aagagaccgggaaaagagccgcagcaggtgaagcgggaggtgctaaagcaggaggagcgg
ccgcagccgtacctcgtcaccaggaccacggagctgccgcccaggtgggacggcccggcc
gggaccatcgtgctcatcgacaagcccaaaggatggacttcatttactgtttgtggcaag
ttgcggcgcttggtgaaagtacaaaaggttggacatgctggaactctggaccccatggca
actggattgttgattgtttgtgtaggaaaagcaaccaaaatagttgatagctaccaagga
atggttaaaggctatagcggtgttttccgacttggagaagccacatcaacctgggatgca
gattcaccaattatccagagggaaccatgggaacacatcaaagatgaagatattagaaag
gcagcagcatcattcaagggtgagatatggcaagttcctccaatgttttctgccattaag
gttggtggtgaaaagatgtatgacaaagcaaggaggggtgaaacagtagagctttcacca
agaagaatatcaatataccaatttgatattgagcgcagtttggaagacagacagaatttg
atatttcgagttacttgctcaaaaggaacatatgttcggtccctatgtgcggacttgggt
aaagcacttggaagctgtgctcatttaactgccttgcggagagactcaataggtgaatac
tcggtcaatgatgcttggaacttcgatgagcttgagcaacaaatcaccaaggggttaggt
cacacccgcagctgcgtactccttccgtctaaaaaaggcatgcaattatag
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