Miscanthus floridulus: 136512965
Help
Entry
136512965 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136512965
04121 Ubiquitin system [BR:
mflo04121
]
136512965
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136512965
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136512965
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136512965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
Zn_ribbon_8
Fimbrial_K88
Rad50_zn_hook
CxC4
FAR1_N
Motif
Other DBs
NCBI-GeneID:
136512965
NCBI-ProteinID:
XP_066363062
LinkDB
All DBs
Position
16:11658913..11660835
Genome browser
AA seq
408 aa
AA seq
DB search
MATPSSPSPSRSPTSSYWCYQCDRFVRAAASASPSPACPSCGGGFLEEMGAPPPRAAYLR
RPSVHHHHHHVAAASADLRARRGGAGSGATGSRASPFNPVIVLRRSPPTATDAADGSSSP
TANPTNTGSSFELFYDDGAGSGLRPLPDSMSDFLMGSGFERLLDQLAQIEAGGLAAARAR
DAPPASKAAVESMPVVSVGAVHVAADAHCAVCKEPFELGAEAREMPCAHIYHADCILPWL
ALRNSCPVCRHEMPTDAPRAAGATAAAGATNAGEEETTVGLTIWRLPGGGFAVGRFAGGR
RPEERELPVVYTEMDGGFNSGGAPRRISWGSRQAASTDRGTVRSFLRNVFACFGRRGHAS
SSASRSHAMPELNDDDASDHSAAFSHGSRSRSTSWRLEDGHADAMVQR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgtcctccccctccccctcccgctccccgacctcctcctactggtgctac
cagtgcgaccgcttcgtgcgcgccgccgcctccgcctccccctcccctgcctgcccctcc
tgcggcgggggcttcctcgaggagatgggcgcgccgccaccacgcgcagcctacctccgc
cgccccagcgtgcaccaccaccaccaccacgtcgccgccgcatccgccgacctccgcgcc
cgccgcggcggcgctggctccggcgccaccggctcccgcgcctcgcccttcaaccccgtc
atcgtgctccgccgctcccctcccaccgccaccgacgccgcagacggctcctcctccccc
accgcgaacccaaccaacaccggcagcagcttcgagctgttctacgacgacggcgcggga
tcgggcctgcgcccgctgcccgacagcatgtcggacttcctcatggggtcgggcttcgag
cgcctgctggaccagctggcgcagatcgaggcgggcgggctagcggcggcgcgtgcccgc
gatgccccgccggcgtccaaggccgccgtcgagtccatgcccgtcgtctccgtcggcgcc
gtccacgtcgccgccgacgcgcactgcgccgtctgcaaggagcccttcgagctgggcgcc
gaggccagggagatgccctgcgcgcacatctaccacgccgactgcatcctcccctggctc
gcgctccgtaactcctgccccgtctgccgccacgagatgcccaccgacgccccgcgcgcc
gcaggcgccacggccgccgctggtgccaccaacgccggggaggaggagactacggtcggg
ctcaccatctggaggctgcccggcggcgggttcgcggtcgggaggttcgccggcgggcgg
aggcccgaggagagggagctgccggtcgtgtacacggagatggacggcgggttcaacagc
ggcggcgcgccccggcggatctcgtggggatccaggcaggccgcgtccacggacaggggc
accgtccgcagcttcctgcgcaacgtcttcgcctgctttggaagacgcggccacgcctcc
tcttcggcgtcaaggtcgcacgccatgcctgagctcaacgacgacgacgcgtctgaccat
agtgcagcgttcagccatgggtctaggagccggagcaccagctggaggctcgaggacggc
catgccgacgccatggtgcagagatga
DBGET
integrated database retrieval system
