Miscanthus floridulus: 136513095
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Entry
136513095 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136513095
04121 Ubiquitin system [BR:
mflo04121
]
136513095
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136513095
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136513095
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136513095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4
zf-RING_5
Zn_ribbon_8
zf-C3HC4_3
Rad50_zn_hook
CxC4
Motif
Other DBs
NCBI-GeneID:
136513095
NCBI-ProteinID:
XP_066363190
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All DBs
Position
16:complement(13045691..13047569)
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AA seq
407 aa
AA seq
DB search
MATPSSPSPSRSPTSSYWCYQCDRFVRAAASASPSPACPSCGGGFLEEMGAPPPRAAYLR
RPSAHHHHHVAAASADLRARRGGAGSGATGSRASPFNPVIVLRRSPPTATDAADGSSSPT
ANPTNTGSSFELFYDDGAGSGLRPLPDSMSDFLMGSGFERLLDQLAQIEAGGLAAARARD
APPASKAAVESMPVVSVGAVHVAADAHCAVCKEPFELGAEAREMPCAHIYHADCILPWLA
LRNSCPVCRHEMPTDAPRAAGATAAAGATNAGEEETTVGLTIWRLPGGGFAVGRFAGGRR
PEERELPVVYTEMDGGFNSGGAPRRISWGSRQAASTDRGTVRSFLRNVFACFGGRGHASS
SASRSHAMPELNDDDASDHSAAFSHGSRSRSTSWRLDDGHADAMVQR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgtcctccccctccccctcccgctccccgacctcctcctactggtgctac
cagtgcgaccgcttcgtgcgcgccgctgcctccgcctccccctcccctgcctgcccctcc
tgcggcgggggcttcctcgaggagatgggcgcgccgccaccgcgcgcagcctacctccgc
cgccccagcgcgcaccaccaccaccacgtcgccgccgcatccgccgacctccgcgcccgc
cgcggcggcgctggctccggcgccaccggctcccgcgcctcgcccttcaaccccgtcatc
gtgctccgccgctcccctcccaccgccaccgacgccgccgacggctcctcctcccccacc
gcgaacccaaccaacaccggcagcagcttcgagctgttctacgacgacggcgcgggatcg
ggcctgcgcccgctgcccgacagcatgtcggacttcctcatggggtcgggcttcgagcgc
ctgctggaccagctggcgcagatcgaggcgggcgggctagcggcggcgcgtgcccgcgac
gccccgccggcgtccaaggccgccgtcgagtccatgcccgtcgtctccgtcggcgccgtc
cacgtcgccgccgacgcgcactgcgccgtctgcaaggagcccttcgagctgggcgccgag
gccagggagatgccctgcgcgcacatctaccacgccgactgtatcctcccctggctcgcg
ctccgtaactcctgccccgtctgccgccacgagatgcccaccgacgccccgcgcgccgca
ggcgccacggccgccgctggcgccaccaacgccggggaggaggagactacggtcgggctc
accatctggaggctgcccggcggcgggttcgcagtcgggaggttcgccggcgggcggagg
cccgaggagagggagctgccggtcgtgtacacggagatggacggcgggttcaacagcggc
ggcgcgccccgtcggatctcgtgggggtccaggcaggccgcgtccacggacaggggcacc
gtccgcagcttcctccgcaacgtcttcgcctgctttggaggacgcggccacgcctcctct
tcggcgtcaaggtcgcacgccatgcctgagctcaacgacgacgacgcgtctgaccatagt
gcagcgttcagccatgggtctaggagccggagcaccagctggaggctcgacgacggccat
gccgacgccatggtgcagagatga
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