Miscanthus floridulus: 136513214
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Entry
136513214 CDS
T10264
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136513214
Transcription machinery [BR:
mflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
136513214
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
DUF4407
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
136513214
NCBI-ProteinID:
XP_066363300
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Position
16:116948728..116951153
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AA seq
512 aa
AA seq
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MTSTVTTPSRPLAAGSRPRRSGPAVLSLSKGSSSPRRRQALSTSCAALASPEKERTRNKL
PPPPPSRTAAAAAATEQQQEEEEEKATDYNEVAAVLESIYKLSPAVEVEEEKRHGSGDED
DEGEGGKAKKKKKRKSRVAGRSTVIVKSRRRRRGRRMDLGKRVEMKSAAATSREQKQGEE
DDGEREFEEMLLREHSVSTDMGSLDWKRMKIPPVLTSSQSARLFKTMQPMKAIFEVQESL
REELQRDPTDAELAEATGMTVHQLRRRLDVGRAARNKLIKHNLRLVPYAINKYYPDMGTD
ERFDDLCQAGANGLITAIDRFEPKRGFRISTYALFWIRHSIVRAMTLSSFTRFPFAMESE
RQEIGKAREELAFELGRPATDEEVRRKVGISPQRYRDVLRMTRPTYSLHARNRVTQEELI
NEVTDDDAIGVDAGGRHNTLLRLAIDDLLDSLKPKESLVIRQRFGLDGRGKRTLSEIAGN
LSISREMVRKYELKALMKLKHPTRVEYLRRYM
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgacgacccccagccggccgctcgccgccgggagccggccgcggcgg
tccggtcccgccgtgctctcgctcagcaagggtagtagcagtcctcggcggcgccaggcg
ctgtccacgagctgcgccgcgctcgcgtcgcccgagaaggagcgcacgcgcaacaagctc
ccgccgccgccgccgtcgaggaccgccgccgcggcggcggctacggagcaacagcaggag
gaggaggaggagaaggccacggactacaacgaggtcgcggccgtgctggagagcatctac
aagctcagccccgccgtggaggtcgaggaggagaagcgccacggcagcggcgacgaagac
gacgaaggcgagggcggcaaggccaagaagaagaagaagaggaaaagcagagtggcgggc
cggagcacggtgatcgtgaagagccggcggcggcggcgcgggaggaggatggacctcggg
aagagggtggagatgaagagcgccgccgctactagcagggagcagaagcagggggaagag
gacgacggagagcgcgagttcgaggagatgctgctgcgggagcactcggtgtccacggac
atgggcagcctggactggaagcgcatgaagatcccgccggtgctcacctcgtcgcagagc
gcgcgcctcttcaagaccatgcagcccatgaaggcgatcttcgaagtgcaggagagcttg
cgagaggagctgcagagggaccccaccgacgcggagctcgccgaggccaccggcatgacc
gtccaccagctccgccgccgcctcgacgtcggccgggccgccaggaacaagctcatcaag
cacaacctccggctggtgccgtacgccatcaacaagtactacccggacatgggcaccgac
gagcggttcgacgacctgtgccaggcgggcgccaacgggctgatcacggccatcgaccgg
ttcgagcccaagcgcgggttccgcatctccacctacgcgctcttctggatccggcactcc
atcgtgcgcgccatgacgctgtccagcttcacccgcttcccgttcgccatggagtcggag
cggcaggagatcggcaaggcccgggaggagctggcgttcgagctcggccggccggccacg
gacgaggaggtgcggcggaaggtgggcatctccccgcagcggtaccgcgacgtgctgcgg
atgaccaggcccacctactcgctgcacgccaggaaccgcgtcacgcaggaggagctcatc
aacgaggtcaccgacgacgatgccatcggcgtcgacgccggcggcaggcacaacacgctg
ctccgcctcgccatcgacgacctcctggactctctgaaacccaaggagagccttgtgatc
aggcagcggttcgggctggacggcagggggaagcgcacgctcagcgagatcgccggcaac
ctcagcatctcgcgggagatggtgcgcaagtacgagctcaaggcgctcatgaagctcaag
caccccacaagggtggaatacctgcgcaggtacatgtga
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