Miscanthus floridulus: 136513276
Help
Entry
136513276 CDS
T10264
Name
(RefSeq) protein RNA-directed DNA methylation 3-like isoform X1
Organism
mflo Miscanthus floridulus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
Spt5-NGN
KOWx_SPT5
KOW5_SPT5
KOW
Spt5_N
Motif
Other DBs
NCBI-GeneID:
136513276
NCBI-ProteinID:
XP_066363365
LinkDB
All DBs
Position
16:97956563..97980097
Genome browser
AA seq
1634 aa
AA seq
DB search
MAVKGKGKQVATESPGPGAGGASGSGGKRRKATGEAGAGPSSSSAAKRRRRAGVLQFVDD
VAGVDDDYEEEEDELELESEDDPDDGFFTGGEHVQNLSHKRTERSHPLPFLVKEEELSGD
ELEEFIKNRYSNRGKYAADRSYSREDDDIFPNDCALKEPTIWRVKCMVGRERQMAFCFMQ
KFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSVYVSRITSVPAAEV
PSLLSSRTKPFVISRGTWVRMKNGNYKGDLAQVVNLDDGRKKVMIKIIPRVDLHAISKKF
GGAVSLKEAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKKVAL
SSLIYWGIQLTETELLKFSSSPTNRASADDLDWLSGMYGSKKRNLPAERDMKSSSSKIKS
SKTSDLKASTSTENYDDNDEFNLHDLVLYGRKDFGVIIAVEKGGFRILKGGPEGSAVTVR
KQDIKKVCVDKMFTAVDHQKKTISINDTVNVVEGPCQGKQGVVKHLYLGILFIYNESESE
NCGFFCAQSGSCEKIQKGLGSSTTESSDFPTPMFSEPTYEQNEHRDTERPYRSTREQLFS
IGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANRGDNLSGAPA
SKFGSQDTSFFGSEAGKTSWDNGLPSFGSDSWQPFSSSTVPVQNAGGESEADPWCKKTSA
EDDSDPYGKKTDGDSDPWGKEAVSAAAGDSDPWGKKVLSSADGDSDPWGKKATSSAVEVW
NTSATQEEGSSGNAWDKQAVVGGSDAAGSSWDRAVVNKESEKSDNWGESCRVMDMGTGAD
TDPWGSKVKAVDMEGPNSWEKATVPPDSKLEDVSQGWGRPKGNSTEDQTKDNVSKDVDNN
RAWGSSLPVTEDGTWGKSKDSTCDGAGGAGGWDASAANWNKSSVVADAHDEGWGKGNWSS
AKSEETNNEIGNWNKAGASDQAGDSSWDKPKSFGGDGWNKGDDQNSSWNRPGNFGGGRGF
GRGRGRGRGQESGDFNGRNDQGSWKNSWGGDNAERPSWRSDNQVDNEAGDSGGYRGRGRG
GRGQYGGRGRGRDNGWRNGDRSDSVFGREQNSGDGPKWGGGGNWNATNPPSNQPWSSSGG
TKSYGQNQPSTWNNSEDNKPSVGEQGDPWASKVSSTEGKEQQNDPWSSKMTSGGAEDTSG
GWDTKVKDSSCNDGGEGLQNDPWANKIGSNEGKEQENDPWASKMSSTVGADDKNGSWNTT
AKDTPSKEKADDPWNSKGGNDDSKKTDTWGAGSSGGNQESSWSKPNFSLGDQEPTWNNPR
FGDDDNGNNRGGFGRGNRGRGRGRNFGDGGGSSWNEGNRNDESGGGRSGELWNRRDFDGG
RGRGRGRFGRGDRNQDNNFGSGDGGSWGSGRGDGGRGGYRNWNDNNERKPFGQGGGWSQS
SDWNANKAFSKSKPSWEAQNTSGGDDRAGKSDANNSWSQNRSPSILGQPSDSKSKTSWEA
QNTSGGDDQAGKSDANNSWSQNRSSPSILGKPSGDANKSSAWGAPSGGAGGGGSWGKSNE
DNWNSSGGSAKEKPSWGGGSEAPPKKEVDPWGKGGQGSGSQGGGGGSSWDKAADKAADGA
WNGNKGIDTGSGGW
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggggaagggcaagcaggtggccaccgaatcccctggcccaggcgccgga
ggagcctccgggtccggcgggaagcggcggaaggcaactggcgaagcgggggcggggccc
tcgtcgtcctccgccgcgaagcgccgccgtcgcgccggggtcctccagttcgtcgacgac
gtagccggcgttgacgacgactatgaggaggaagaggacgagctcgagctcgagtccgag
gatgaccccgatgacggtttctttactggtggggaacatgtacaaaatctgagtcacaaa
agaacagaaaggtcacaccctcttccatttcttgtaaaggaagaggagcttagcggcgat
gaacttgaggaattcatcaagaaccgatacagtaatcgtgggaaatacgctgctgatcgg
agctattctagagaagacgatgacattttccccaatgattgtgcactcaaagagcctact
atttggagagttaaatgcatggttgggcgtgagcgccaaatggccttctgcttcatgcaa
aaatttgttgacctgcgaaaaattggtaccaaagtgccaattatcacagcatttgcactt
gatcacataagagggtttgtttttgttgaagcggagaaggcctgtgatgttacagaggct
tgcaaagggttttgtagtgtgtacgtgagcagaattacttctgttcctgcagctgaagtt
cctagcttgttatccagccgtacgaaaccatttgtaatctctcgtggtacatgggtccgc
atgaagaatggaaactataaaggtgatctggcacaggtcgttaatttggatgatggacgc
aaaaaagtgatgataaaaattatacccagagttgacctccatgctatttcgaaaaaattt
ggtggtgcagtttcactaaaagaagctgcagttcctgctccacggttgatcagctcccaa
gaactagagttcttcaggcctcatattgaaataaagcgcgatcgtcagactggtgaagtt
tttgaagtacttgatggtctgatgttcaaagatggatttctgtataaaaaggttgcactt
agttctttgatttattgggggatacaactgacagaaacggagcttttgaagttctcttct
agtccaaccaatagagcttctgctgatgacttggattggctctccggcatgtatggttct
aagaaaaggaaccttccagcagaacgagatatgaagtcatcatcttctaaaataaaatcc
tccaaaacatcggaccttaaagcatcaacttctactgaaaattatgatgataacgatgaa
ttcaaccttcatgatcttgtactctatgggcgaaaagattttggtgtgatcattgctgtt
gagaaaggtggatttaggatactaaagggtggtcctgaaggatctgcggtgacagtgaga
aagcaggatattaagaaagtctgcgtagataaaatgtttacagctgtggatcatcaaaag
aagacaatatccattaacgacactgttaatgttgtggaagggccatgtcagggtaagcaa
ggggtcgttaaacacttgtacttgggaatactgttcatttataatgagagtgaaagtgag
aactgtgggtttttctgtgctcaaagcgggtcatgcgaaaagatacagaagggtctggga
agctctactactgaaagttcggactttccaactcccatgttttctgaacctacttatgag
caaaatgagcatcgggacacagaaaggccttacaggagcaccagagaacaacttttctct
attgggcagatgctgcgtattagaaagggtcctttgaagggctacctctgtcgagtagtt
cggatatttcggaatgatgtgaccgttaagctagattctctactgaaaattgttacagta
caagctgatcttctctctgtcccagctaataggggggataacttgtctggtgctccagct
agtaaatttggaagtcaagatacatccttctttggttcagaagctggcaaaacttcatgg
gacaatgggttgccatcgtttggcagtgactcttggcaacccttttcaagttccacggta
ccagtccagaatgcaggtggagaatcagaagctgacccatggtgtaagaaaacttctgct
gaagatgattctgatccatacggtaagaaaacggatggtgattctgatccgtggggtaag
gaagcggtatctgctgctgctggtgattctgatccatggggtaagaaagtgttgtcttct
gctgatggtgattctgatccatggggtaagaaagcaacatcatcagctgttgaagtttgg
aacactagtgccactcaagaggaaggttctagtggcaatgcatgggacaaacaagctgta
gttggtggatctgatgctgctggcagctcctgggacagagcggttgtcaataaggagagt
gaaaagagtgacaactggggagagtcttgcagggttatggacatgggaactggagctgac
acagacccttggggaagcaaggtcaaggcagtagatatggaaggaccaaatagctgggaa
aaggctacagtgcctccagacagtaagctggaggatgtcagtcaaggatggggccgacct
aagggcaactcaactgaagaccaaacaaaagacaatgtttctaaagatgtggacaacaat
agggcttggggcagttctttgcctgtcactgaagatggtacctggggcaagtcaaaagac
agcacttgtgatggagcaggtggcgcaggaggttgggatgcttctgctgccaactggaat
aaatcatctgttgtggctgatgcacatgatgaaggctggggcaaaggaaactggtcatct
gctaaatctgaagaaacaaacaatgaaattggaaattggaacaaagccggagcttcagac
caagctggtgacagcagttgggataaaccgaaatcttttggtggtgatggttggaacaag
ggtgatgatcagaatagcagttggaacaggcctggaaattttggaggtggacgtggcttt
gggcgaggacgagggagaggtaggggccaggaatctggagatttcaatggcagaaatgat
caaggaagttggaagaattcatggggtggtgacaatgctgaaagaccctcttggaggtct
gataatcaggtagacaatgaagctggagattctggtggatataggggaaggggaagagga
ggaagggggcaatatggaggacgagggagagggagagacaatggttggagaaatggtgat
agaagcgattctgtgtttggaagggaacagaacagtggtgatggaccaaaatggggtggt
ggaggtaattggaacgctacaaatccaccaagtaaccagccctggagtagcagtggaggc
accaagtcatatggtcaaaatcagccttcgacttggaataattcagaggataacaaacca
tctgtaggtgaacaaggtgatccttgggcaagcaaggtgtcttctactgaaggtaaagaa
caacagaatgatccttggtcaagtaagatgacttctggtggtgctgaggataccagtggt
ggctgggacaccaaggtgaaagactcttcctgcaatgatgggggtgaaggactacagaat
gatccatgggcaaacaagattggttctaatgaaggtaaagaacaagaaaatgatccttgg
gccagcaagatgtcttctactgtgggtgctgatgacaagaatggtagctggaacacgaca
gcaaaggacactccatctaaggaaaaggctgatgatccctggaatagtaaggggggtaat
gatgacagcaagaaaactgacacctggggtgctggatcgtcaggtgggaatcaggaatct
tcttggagcaaacctaatttctctttgggtgatcaggaacctacttggaacaacccaagg
tttggtgatgatgacaatggaaataatagaggtggatttggacgtggaaatcgaggcaga
gggagaggaaggaattttggggatggtggtggatcatcatggaatgaaggcaatagaaat
gatgaatcaggtggtggaaggtctggagagctatggaacagaagggattttgatggtggc
agaggaagaggcagaggtcgctttgggcgaggtgaccgtaatcaagacaacaactttggg
tcaggagatggtggcagctggggctctggcaggggagatggtggccgcggtggttacagg
aactggaacgacaacaatgaaagaaagccctttggtcaaggtggtggctggtctcagtct
tccgactggaatgccaacaaagctttctcgaaaagcaagcccagctgggaagcacaaaac
acctctggtggagatgatcgggcaggaaagagtgatgcaaacaactcctggagtcagaac
agatctccatctatcctgggtcagccaagtgattcgaaaagcaagaccagctgggaagcg
caaaacacctctggtggagatgatcaggcaggaaagagtgatgcaaacaactcctggagt
cagaacagatcatctccatctatcctgggtaagccaagtggtgatgctaacaagtcaagc
gcttggggtgctcccagtggaggagctggcggcggaggttcttggggaaagagcaacgag
gataactggaactcatcgggaggatcagccaaagagaagccttcatggggtggtgggtca
gaagctcctcccaagaaagaggtcgatccatggggcaaaggtggccaggggagcgggagc
caaggagggggtggtggcagttcctgggataaagcggcagataaagcggcagatggtgca
tggaacggcaacaagggtattgatactggcagtggtggatggtaa
DBGET
integrated database retrieval system
