Miscanthus floridulus: 136513428
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Entry
136513428 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
136513428
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
HECT type E3
136513428
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GFIT
Other DBs
NCBI-GeneID:
136513428
NCBI-ProteinID:
XP_066363529
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Position
16:16789765..16796738
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AA seq
1357 aa
AA seq
DB search
MDAGDDAVLQYALAAIADESAGAGEAAAALAALCDVLAVSGPDFILAIPHAGLAARLPAL
LAGSGSDGGGDVPLLAARAIAEACEAAPQWASRFARHGAVEALRDRLLAVDCIELAEECL
RALDAISLECPDQCLRRGVAAAVLQFFDFFSTNKQKVALQIVSNIFTDYDEVNAPKAMEA
VPALCNLLQYSDRMILESAISCLALVAAGASGNAKHMSKLCESNVVEVTMTLMDNEGWKS
LSDATLTGILGLLKSLVAVSAKAVKSLFEFNFCELLKQMITYYSYLHHDSDKVQILVELI
YQLMPPLETSGQHAKLVTAKRKLIMRQSRYMNQLASIVALIVQVAKSAALSSICYSCVVV
IGKIVELSTPNFLMELQKTVNLSSFLNCLLARKNQHILFEILKISRTLLEKDQRFSLETL
TKEGVKHAIEYIVSQSKNISHQSERNNSVKESCLCFDLESSSTVEACSIENDAVMELAEE
IKKNFFSVKRSIKSPHRFGFTLKSVRDFFARLNVYALTHPAENPDSCKQLSDLSRRLLSD
ELLVTSTFEFVQSGSIKCFAVYLSNGAYCNADLNDGPVLEQLSKVQSRLQKFANLALTLS
NESSANPLGILVEKLLDTLHMCYDSFPVMLSDEQISRESMMIPLRYPEAQKPTSLELKFQ
RSQKERELRNYNGVLSVDLFSTPDTTEPILFPEVFRRTDQEPGSKNSNQEKGANGSRKSV
ESKNDDGNTSSRLRFLYNGVTLQPSVTFFESILRLMNKGQSDLLIDPSFWEEEHNITYRK
RNKSKEISSQSSYYTRLSYVQENLQRAWSKDPFFTAILHGKLPGDLDVSDLSYNLLFMLK
VLEGLNRFSYQLLMDEQINKFAEGTLQDMDLEVARYAVPRHQFISSLLVNKLEVQMQDAL
FEDGLIPSWCVYLVETCPFLLSFDTRWKYFCLTVHRSFIPDQVNSSPEQVHNILNQVNGH
SDQVKSPPQSKRYRVARSAILEGAVSVMTSHGPSSRIIEVEFEGEVGTGRGPSFEFYTTA
SHELQRAGLGMWRGDSGEHGFIHAPFGLFPKPWSSSGTSSQGVDFTNMLQKFKLLGNLVA
RAVLDGRILDIPLSKAFYKVMLEQELDIYDIPLFDPELGKTVIEFQALVSRKKFLETSSR
ASNPKADLSFKNVKLEDLCLDFTLPGNPEYELVTGGSEKLVTLDSLDEYVSLVVDATLKS
GIAKQIEAFKSGINEVFALKALKMFTEEEMERILCGEQDAWALKNLEDHMEFEHGYDMSS
QPIIIFLEILREFGREDQRAFIQFSTGAPQLPLGGLASLDPKLNVVRKQCDGNVDDELPS
VNTCRHFIKLPPYSSKEIMRTKLKYAITEGLGSFHLS
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcgacgacgcggtgctgcagtacgcgctggcggcgatcgccgacgagtcc
gcgggcgcgggggaggcggcggcggcgctggccgcgctctgcgacgtgctcgccgtgtcg
gggccggacttcatcctcgccatcccgcacgcgggcctcgccgcgcgcctcccggccctc
ctcgccggctccggctccgacggcggcggcgacgtgccgctgctcgccgcgcgcgccatc
gccgaggcctgcgaggccgcgccccagtgggcctcgcgattcgcgcgacacggcgccgtc
gaggcgctccgcgacaggctcctcgccgtcgactgcatcgaactcgccgaggagtgcttg
cgagctctggacgccatatctttggaatgccctgaccagtgcctcagacggggggtggca
gctgctgtgctgcagttcttcgacttcttttcgacgaacaagcagaaagtggcgctccag
atcgtctcgaacatcttcaccgattatgatgaagtgaatgcgcctaaggccatggaggct
gtgcctgcactgtgcaacctcctgcagtattctgataggatgattctcgaatccgctatt
tcgtgcttggcattggttgctgctggtgcttctggaaatgctaaacacatgagtaagctc
tgtgaatcgaatgtggtcgaggtaacaatgaccttgatggataatgaggggtggaagagc
ctcagtgatgccaccttaactggcatcctggggctgcttaaaagtcttgttgctgtctcc
gcaaaggctgtgaagtctctttttgagtttaatttttgtgaattgctcaagcagatgata
acttattacagttacttgcaccatgatagtgataaggtccagattcttgtggagctcatt
taccagcttatgccacctcttgaaacctctggtcaacatgctaaactagtcactgcaaag
aggaaactcattatgagacaaagtcgatacatgaaccagcttgctagcatcgtcgccctt
atagtacaggttgcaaaatctgctgcactatcatcaatttgctacagctgtgttgttgtc
attggcaagattgttgaattaagcacacctaatttcctaatggagttacagaagactgta
aatctctcaagctttcttaattgtttgttggcccggaaaaaccaacacatcttattcgaa
atactcaagatttcaaggacccttttggaaaaagaccagcgcttttccttggagaccttg
accaaggagggtgtaaagcatgcaattgagtatatagtatcacaatcaaaaaacatcagt
caccagtcagaaagaaacaacagcgtgaaagaaagttgcctttgctttgacctggaatct
tcctcgactgttgaggcatgcagcattgagaatgatgctgtcatggaactagcagaagag
ataaagaaaaacttcttctcggtaaaacggagcataaaatctccacataggtttggattt
actctcaaaagtgtcagggacttttttgctaggttgaatgtatatgccttgacacaccct
gctgaaaatcctgatagctgcaagcagttgtctgatctttcaaggagattattatcagat
gaactgctagttacttccacttttgagtttgtgcagagtgggtctatcaaatgttttgca
gtttatctctcaaacggggcatactgcaatgcagacctcaatgatggacctgtacttgag
cagcttagtaaggtgcagagtcggctgcagaaatttgctaatttggctctcaccctctcc
aatgaaagttcagcaaatccacttgggattttggtggagaagctgctagacactttgcac
atgtgctatgacagttttcctgtaatgctatctgatgaacagatttcacgagagagcatg
atgattccgctgagatatcccgaggcccagaaaccaacgtcattggaattaaaatttcag
aggtcgcagaaggagagagaattacgcaactacaatggtgttcttagtgtcgaccttttc
tcaacacctgataccactgagccaattctatttcctgaggtctttagaagaactgatcag
gaacctggatccaagaattccaatcaagagaaaggagcaaatgggagcagaaaatcagta
gagtccaaaaatgatgatgggaacacatcctcaagactgagattcttgtacaatggtgtg
acactccaaccatctgttacattttttgagtcgatccttcgtctgatgaacaagggacaa
tctgatctcttgatcgacccatctttctgggaagaagaacacaacataacctataggaaa
agaaacaaaagcaaggagatctcttctcagagttcctactatactcggttatcgtacgtg
caagaaaaccttcaacgcgcatggtcaaaggacccttttttcactgccatacttcatggc
aaacttcctggtgatctggatgtgtctgatctgtcatacaatcttttattcatgctgaaa
gttcttgaagggctgaaccgtttttcataccaactgttgatggatgaacagataaacaaa
tttgctgaaggaactctacaagatatggatcttgaggtggcaagatatgcagttccaaga
catcagttcatcagtagccttcttgtaaataagctagaggtgcaaatgcaagatgccttg
tttgaggatggtctcataccctcatggtgtgtctatctggttgagacctgcccattcctg
ttgtccttcgacacacggtggaagtacttctgcctgactgtgcatcgctcattcattccg
gaccaagttaacagttctccagaacaggttcacaatattttaaaccaagttaatggtcac
tcggaccaggttaagagtcctccacaaagtaaaaggtacagggtagcccgaagtgctatc
cttgaaggtgctgtatcagtgatgaccagtcatggcccaagcagtaggatcattgaggtg
gagttcgaaggagaggttgggactgggcgaggtccatcatttgaattctacactacagct
agtcatgaacttcaaagggccgggcttggaatgtggagaggagacagtggtgaacatgga
ttcattcatgctccttttggactatttccaaagccgtggtcatcatcaggcacttcatca
caaggagttgattttactaatatgctacaaaaattcaagcttttagggaatcttgtagcg
agagcagttctggatggaaggatcctggatattccactttctaaagcattttacaaggtc
atgctcgagcaggagctcgatatatatgacatcccactgtttgatcctgagctgggcaag
acagtaatagagtttcaagcacttgttagcaggaagaaatttttggaaacctcttccaga
gcatctaaccctaaggctgatttgtcctttaaaaacgtgaaattggaggatttgtgcctt
gacttcactcttcctggaaatcctgaatatgaacttgttactggaggctcagagaagtta
gtaacacttgacagtttagatgaatatgtatctttggttgttgatgcaacactgaagagc
gggattgccaagcagatcgaggctttcaagtctggaattaatgaggtttttgctcttaag
gccctcaaaatgtttacagaggaggaaatggaacgcatactatgtggtgaacaggatgct
tgggctttaaagaaccttgaggatcacatggagtttgagcatggctacgatatgagcagt
caaccgattattattttcctggagatattgcgagagtttggaagagaggatcagcgggct
ttcatacaattcagtactggagcccctcagctcccgcttggtggcctagcttcgcttgat
cccaagctcaatgtcgtacgcaagcaatgcgatggcaatgtagacgacgaattgccaagt
gtcaatacctgccggcactttatcaagctccctccttactcctcgaaggagataatgaga
acgaagctcaaatatgccattacagagggtctaggctcctttcacttatcatga
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