Miscanthus floridulus: 136513451
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Entry
136513451 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136513451
Transcription machinery [BR:
mflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
136513451
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
DUF6927
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
136513451
NCBI-ProteinID:
XP_066363550
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Position
16:118625592..118629113
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AA seq
593 aa
AA seq
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MGLQMIHGRPCAYCCPSSSSSSSSSWMMQALPPKQSHHPLNGGKPIFSESLAALAMHLLL
KRRRDRSSRDIASSAGVLQITENKSAAANLTKHKVLHLHHSTIRKVMSAERKLLDDALDR
TSVQYDSWIDEETSFWMDRDNTNSNLQYGLLMQNLQELETSLDGKDLKTLENDILAHIEQ
LGALRSFNASMNRATLLDNQTHDQPDSSLLDHQIIKFDPETPLDEEQEGSEVVVVRSGKS
QERKLRRIRASEKGTRISVKVNPRRPKKSSRKASSSQFISEWKSHPGRRRIIVREQSALL
ATIKECASLEKIREKMVKEGQEVSYHRWAEAAGVDEAELMSRLQAGYCCRERLLVTTEWL
VRCIARSYTGMGTALDDLLQAGKMGVLDGAEKFDTRKGCRFSTYVKYWIRKGMLALLAEN
SGVTLLPARMESIMRKVKEARRGIRYSQGRNPSDSEIAAAVGVSVANVRLARKCSRRPVS
LYSEIGIGQHAKFAEVIPDEAAASAEAPDEAALFRGQLRERLLLVLGRLPAREGHVLRLR
HGLEDGRCRSLEEIGGMYRVSKEWIRKIEKSAMARLRDDDDVRRDLHDFVCRF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcagatgatccatggcaggccatgcgcctattgctgcccgtcgtcctcctcg
tcgtcctcctcctcgtggatgatgcaggccctgcccccaaaacagtctcaccatccattg
aatggagggaagccaattttctctgaatcccttgcagcactggccatgcatctcctgcta
aagcgtcgcagagaccgtagcagcagggacattgcgtcttcagccggcgtgctccaaatc
acagagaacaaatcagctgcggccaacttaacaaaacacaaggtcctccatcttcatcac
tctacgatcagaaaggtgatgagtgcagaaaggaagctccttgatgacgctcttgacaga
actagtgtacagtatgacagctggatagatgaagagacatcattctggatggacagggat
aacacgaacagcaatttgcagtacggtttgttaatgcagaaccttcaggagttggagacg
agtttggatggtaaagacttgaagacgctggagaatgacatccttgcacacattgagcag
cttggagctctgagatcgtttaacgcgtctatgaacagggccaccctgctagacaaccaa
acacatgatcaaccagacagctctctgcttgaccaccaaatcatcaagtttgatccagag
actccactggatgaggagcaagaaggtagcgaagtagtcgtcgtccggagtggcaagagt
caagagaggaagctgagaagaatcagagcgtcagagaaaggaaccaggatctcagtgaaa
gtgaatccgcgaagacccaagaaatcatcccggaaggcgagtagcagccagtttatatca
gagtggaaaagtcacccaggacgaagaaggatcattgtgcgtgagcaatcagcactgcta
gcgaccatcaaggaatgtgcaagccttgagaagataagggagaagatggtgaaggaaggg
caggaggtgagctaccacaggtgggcagaggctgctggtgtggacgaggcagagctgatg
agcagactgcaggcaggctactgctgccgggagaggctgctggtgaccaccgagtggctg
gtcaggtgcatcgcaagatcatacaccggcatggggacggcattggacgatctgcttcag
gctgggaagatgggcgttcttgacggcgcggagaagttcgacaccagaaaggggtgcagg
ttctccacgtacgtcaagtactggatcaggaaagggatgctcgctctcctcgctgaaaat
tcaggagtcaccctgctgcctgcaagaatggagagcatcatgcgcaaggtgaaggaggcg
cggcgcgggatccggtacagccagggcaggaacccgtcggactccgagatcgccgcggcc
gtcggcgtgtcggtggccaacgtgaggctggcgcgcaagtgctcccgcaggcccgtctcg
ctctactcggagatcgggatcgggcagcacgccaagttcgcggaggtgatcccggacgag
gcggcggcgtccgcggaggcgcccgacgaggcggcgctgttccggggccagctgagggag
cggctgctgctggtgctgggcaggctgcccgcacgggagggacacgtgctgaggctgcgc
cacgggctggaggacggccggtgcaggtcgctggaggagatcggcggcatgtaccgcgtg
tccaaggagtggatcaggaagatcgagaagtccgccatggccaggctcagggacgacgac
gacgtgcgtcgcgacctccacgacttcgtctgccgcttctga
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