Miscanthus floridulus: 136513757
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Entry
136513757 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136513757
Transcription machinery [BR:
mflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
136513757
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
NirdL-like_HTH
DUF6927
Motif
Other DBs
NCBI-GeneID:
136513757
NCBI-ProteinID:
XP_066363821
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Position
16:complement(117609759..117612571)
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AA seq
586 aa
AA seq
DB search
MGLQMIHGRPCAYCCPSSSSSSSSSWMMQALPPKQSHHPLNGGKPIFSESLAALAMHLLL
KRRRDRSSRDIASSASVLQITENKSAAANLTKHKSELQVMSAERKLLDDALDRTSVQYDS
WIDEETSFWMDRDNTNSNLQYGLLMQNLQELETSLDGKDLKTLENDILAHIEQLGALRSF
NASMNRATLLDNLTHDQPDSSLLDHQIIKFDPETPLDEEQEGSEVVVVRSGKSQERKLRR
IRASEKGTRISVKVNPRRPKKSSRKASSSQFISEWKSHPGRRRIIVREQSALLATIKECA
SLEKIREKMVKEGQEVSYHRWAEAAGVDEAELMNRLQAGYCCRERLLVTTEWLVRCIARS
YTGMGTALDDLLQAGKMGVLDGAEKFDTRKGCRFSTYVKYWIRKGMLALLAENSGVTLLP
ARMESIMRKVKEARRGIRYSQGRNPSDSEIAAAVGVSVVNVRLARKCSRRPVSLYSEIGI
GQHAKFAEVIPDEAAASAEAPDEAALFRGQLRERLLLVLGRLPAREGHVLRLRHGLEDGR
CRSLEEIGGMYRVSKEWIRKIEKSAMARLRDDDDVRRDLHDFVCRF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcagatgatccatggcaggccatgcgcctattgctgcccgtcgtcctcctcg
tcgtcctcctcctcgtggatgatgcaggccctgcccccaaaacagtctcaccatccattg
aatggagggaagccaattttctctgaatcccttgcagcactggccatgcatctcctgcta
aagcgtcgcagagaccgtagcagcagggacattgcgtcttcagccagcgtgctccaaatc
acagagaacaaatcagctgcggccaacttaacaaaacacaagtcagaattgcaggtgatg
agtgcagaaaggaagctccttgatgacgctcttgacagaactagtgtacagtatgacagc
tggatagatgaagagacatcattctggatggacagggataacacgaacagcaatttgcag
tacggtttgttaatgcagaaccttcaggagttggagacgagtttggatggtaaagacttg
aagacgctggagaatgacatccttgcacacattgagcagcttggagctctgagatcgttt
aacgcgtctatgaacagggccaccctgctagacaacctaacacatgatcaaccagacagc
tctctgcttgaccaccaaatcatcaagtttgatccagagactccactggatgaggagcaa
gaaggtagcgaagtagtcgtcgtccggagtggcaagagtcaagagaggaagctgagaaga
atcagagcgtcagagaaaggaaccaggatctcagtgaaagtgaatccgcgaagacccaag
aaatcatcccggaaggcgagtagcagccagtttatatccgagtggaaaagtcacccagga
cgaagaaggataattgtgcgtgagcaatcagcactgctagcgaccatcaaggaatgtgca
agccttgagaagataagggagaagatggtgaaggaagggcaggaggtgagctaccacagg
tgggcagaggctgctggtgtggacgaggcagagctgatgaacagactgcaggcaggctac
tgctgccgggagaggctgctggtgaccaccgagtggctggtcaggtgcatcgcaagatca
tacaccggcatggggacggcattggacgatctgcttcaggctgggaagatgggcgttctt
gacggcgcggagaagttcgacacccgaaaggggtgcaggttctccacgtacgtcaagtac
tggatcaggaaagggatgctcgctctcctcgctgaaaattcaggagtcaccctgctgcct
gcaagaatggagagcatcatgcgcaaggtgaaggaggcgcggcgcgggatccggtacagc
cagggcaggaacccgtcggactccgagatcgccgcggccgtcggcgtgtcggtggtcaac
gtgaggctggcgcgcaagtgctcccgcaggcccgtctcgctctactcggagatcgggatc
gggcagcacgccaagttcgcggaggtgatcccggacgaggcggcggcgtccgcggaggcg
cccgacgaggcggcgctgttccggggccagctgagggagcggctgctgctggtgctgggt
aggctgcccgcgcgggagggacacgtgctgaggctgcgccacgggctggaggacggccgg
tgcaggtcgctggaggagatcggcggcatgtaccgcgtgtccaaggagtggatcagaaag
atcgagaagtccgccatggccaggctcagggacgacgacgacgtgcgtcgcgacctccac
gacttcgtctgccgcttctga
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