Miscanthus floridulus: 136513781
Help
Entry
136513781 CDS
T10264
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136513781
09123 Folding, sorting and degradation
03018 RNA degradation
136513781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136513781
03041 Spliceosome [BR:
mflo03041
]
136513781
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136513781
mRNA degradation factors
5'-3' decay
Lsm complex
136513781
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136513781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF7452
Swm2
Motif
Other DBs
NCBI-GeneID:
136513781
NCBI-ProteinID:
XP_066363847
LinkDB
All DBs
Position
16:complement(71979432..71981684)
Genome browser
AA seq
88 aa
AA seq
DB search
MSQNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEYTAEG
RRITKLDQILLNGNNIAILVPGGSPPDV
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaataacccctcccagctcctcccatcagagctgatcgaccggtgcatcggg
tccaagatctgggtgatcatgaagggggacaaggagctcgttggcaccctccgcggcttt
gatgtctacgtcaatatggtgctggaggacgtcaccgagtatgaatacactgctgaaggg
cgccgcattacaaaactcgaccagatcctcctgaacggcaacaacatagccattttggtt
cctggtggttcaccacccgatgtgtaa
DBGET
integrated database retrieval system