KEGG   Miscanthus floridulus: 136513781
Entry
136513781         CDS       T10264                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
mflo  Miscanthus floridulus
Pathway
mflo03018  RNA degradation
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136513781
  09123 Folding, sorting and degradation
   03018 RNA degradation
    136513781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136513781
   03041 Spliceosome [BR:mflo03041]
    136513781
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     136513781
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     136513781
Spliceosome [BR:mflo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    136513781
SSDB
Motif
Pfam: LSM DUF7452 Swm2
Other DBs
NCBI-GeneID: 136513781
NCBI-ProteinID: XP_066363847
LinkDB
Position
16:complement(71979432..71981684)
AA seq 88 aa
MSQNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEYTAEG
RRITKLDQILLNGNNIAILVPGGSPPDV
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtctcagaataacccctcccagctcctcccatcagagctgatcgaccggtgcatcggg
tccaagatctgggtgatcatgaagggggacaaggagctcgttggcaccctccgcggcttt
gatgtctacgtcaatatggtgctggaggacgtcaccgagtatgaatacactgctgaaggg
cgccgcattacaaaactcgaccagatcctcctgaacggcaacaacatagccattttggtt
cctggtggttcaccacccgatgtgtaa

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