Miscanthus floridulus: 136514023
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Entry
136514023 CDS
T10264
Name
(RefSeq) protein argonaute 4B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136514023
03036 Chromosome and associated proteins [BR:
mflo03036
]
136514023
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136514023
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136514023
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136514023
microRNA pathway
RISC loading complex
136514023
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
136514023
NCBI-ProteinID:
XP_066364099
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All DBs
Position
16:120457488..120464151
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AA seq
909 aa
AA seq
DB search
MGSHDGEDEELPPPPPVPPDVVPIKAEDAVGESPANKLVKPKRLLMDRPGIGRKGQLVQL
YSNHFKVAVKSTEDFFFHYYVNLKYEDDQPVEGKGIGRKVIDKLQQTYRAELSNKDFAYD
GEKSLFTVGGLPQKNNEFTVVLEDASTGKTAANGSPGGNDSPGGGDRKRVRRPYQTKTFK
VEINFAAKVPMSAIGQVIRGEETENSLEALRVLDIILRQHSAEQGCLLVKQSFFYNNPSN
FVDLGGGVMGCRGFHSSFRGTQSGLSLNVDVSTTMIVKPGPVIDFLLSNQNVNDPSRIDW
QKAKRALKGLRIKTTPANSEFKIFGLSERICKELTFPLRQRNGSNGDCDTIEITVYDYYA
KKGIDLKYSGDFPCINTGRAKRPTYFPIELCSLVPLQRYTKALSTLQRSSLVEKSRQKPQ
ERMTVLNDALQRGNYDSDPMLRACGVSVAPKFTQVEGRILQAPKLKAGHGDDIFSRNGRW
NFTNRKFYQTCSVDKWAVVNFSARCDVRNLIRDLMRNASAKGIQMEEPFDVFEESPSMRR
APVLRRVDDMFGQIKSKLPGAPRFLMCLLPERKNCEVYGPWKRKCLAEFGIVTQCLAPTR
VNDPYLLNLLMKINAKLGGLNSLLQVEASPSIPHVSEVPTIILGMDVSHGHPGQDRPSVA
AVVSSRQWPLISKYRASVHTQSARLEMMSSLFKPRGSDDDGLIRESLIDFYTSSGKRKPD
HIIIFRDGVSKSQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQTGSPD
NVLPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADEVQEFVHSLSY
VYQRSTTAISVVAPICYAHLAAAQVGTFLKLEEMSDASSSQGGHTSAGSAPVPELPRLHE
KVRSSMFFC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcatgatggcgaggatgaagagttgccaccacccccgccggtgccaccagat
gtggttcccattaaagctgaagatgctgtgggagaatcaccagcaaacaagctagtaaag
ccaaagagattactgatggacaggcctggtataggaagaaaagggcagctagtccagctc
tattcaaatcactttaaagtcgccgtgaagagtacagaagacttcttctttcactattat
gtgaacctgaagtatgaggatgatcaacctgttgaaggtaaagggatcggcagaaaggtg
attgataaactgcagcagacatatcgcgctgagctttccaacaaggattttgcatatgat
ggagaaaagagcctgtttacagttggtggtcttccacaaaaaaacaatgaattcaccgtc
gtcttggaggacgcgtctactggaaagactgctgccaatgggagccctggaggtaatgac
agtcctggaggtggtgacaggaagagagtgaggaggccataccagacgaaaactttcaaa
gtggagataaattttgcagcaaaggttcctatgagtgctattggtcaagtcattagaggc
gaagaaacggagaactccctggaggcacttcgtgttcttgatatcatactgaggcagcat
tccgcagaacaaggctgccttttggttaagcaatcgtttttctacaacaacccttcaaac
tttgttgacttgggtggtggtgtgatgggttgccgtggatttcattcaagcttccgcggc
acacagagtggactttccctgaacgttgatgtctcaacaacaatgatcgtgaagcctggc
cctgttattgattttcttctttctaaccagaatgttaatgatcctagcagaattgattgg
caaaaggccaagcgtgctctcaagggcttgaggattaaaaccactcctgcaaattcagaa
ttcaagatttttggtctcagcgagaggatttgcaaagaactaacgtttccactgaggcag
agaaatggtagcaacggagattgtgataccattgaaataactgtctatgactactatgcg
aagaaaggaatcgatctaaagtattctggtgatttcccctgtataaatacagggagggca
aagcgtccaacatattttccaatcgagctatgctcccttgttccgcttcaaagatacacc
aaagctttgtctacgctacaaaggtcatcccttgttgagaagtctagacagaagcctcaa
gaaaggatgacagttctaaatgatgcactgcaacgcggtaactatgattctgaccccatg
ttgagggcatgtggcgtttcagttgctccaaaatttacccaagttgaaggaaggatcctt
caagccccaaagctgaaagctggccatggtgatgatatcttctcacgaaatggacggtgg
aatttcaccaataggaagttttatcaaacctgctctgtggataagtgggcggttgttaat
ttctctgcacgttgtgatgttcggaatcttatccgtgacctgatgaggaatgcatctgca
aagggaattcaaatggaggaaccttttgatgtgtttgaagagagtccctctatgaggcgt
gcacccgtgttgagaagagtggatgatatgtttgggcagataaaatcaaaacttcctgga
gctccaaggttcctcatgtgccttctccctgagaggaaaaattgcgaagtctatggtcct
tggaagagaaagtgcctggccgagtttggtattgtcacacagtgtctagctccaacaaga
gtcaatgatccgtacctgcttaatttgctgatgaagattaatgcaaagcttggtggtctg
aactcgttgctgcaagttgaagcatctccatcaataccccatgtgtcggaagtacccacc
atcatcttgggtatggatgtgtctcatggtcatccaggacaggatagaccttcagtcgca
gcggtggttagttctcgtcaatggcctcttatctctaaatatagagcatcagtgcacacc
caatccgccagactagaaatgatgtcatccttgtttaagccacggggtagtgatgatgat
ggcctcattcgggaatcactgattgacttctacactagctctggaaagcgaaaaccagac
cacattattattttcagggatggagtcagcaaaagtcagtttacccaggtcatcaacatt
gaactggatcagataattgaggcatgtaagtttctcgatgagaagtggtcacccaagttc
actgtgattgttgctcaaaagaaccaccacaccaagttttttcagaccggatcaccagac
aatgttcttcctggaactgtcgtggacaataaagtttgccatcctaagaactttgacttc
tacatgtgtgcacatgctgggatgattggaacaacaaggccgacccattatcatgttctg
cacgatgagataggtttctctgctgacgaagtgcaggagtttgttcattcgctctcttac
gtgtatcaaaggagcacaacagccatctcagtagttgctccaatctgctacgcccacctt
gctgcagcccaggtgggcacgttcctgaaattggaggagatgtcagacgcttcctccagc
cagggagggcatacctcggcgggcagtgctcccgtgccggagctgcctcgcctgcatgag
aaagtgaggagctccatgttcttctgctga
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