Miscanthus floridulus: 136514379
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Entry
136514379 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
136514379
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
HECT type E3
136514379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136514379
NCBI-ProteinID:
XP_066364443
LinkDB
All DBs
Position
16:complement(90307956..90317601)
Genome browser
AA seq
1541 aa
AA seq
DB search
MDRCRKRPDSDPEGCSEPEPPADKRPCTAEPSTSAAAAAAAAAPPPGALQAEQGGSDMDT
SSSGHPGDDDVDADDGDGDGDGDGDGDGDGGSSCESDGDGSPRPRGSGGGRFQRMVDAVA
DEGAGQDAVVAALMELCEALSFCEEDAGGYFPTEAAARALVRRAGGGGDGTGATPDVILL
SVRAITYLCDAMPRAGDAVVRHGLIPVLCSRLLAIEYLDVAEQCLQAFEKISRRQPTQCL
QAGMINAVLAYIDFFAASIQRVAVSAVANACKKVPEDCSQFVLDSVPTLCNLLQSEDKMI
VEKVAACLISIVDSFSTSVDLVDQLCHQGVIEKVLPLIHTGGLTALSPSTCSNLIGFLAK
LACTSLVAVKSLFELGVSSTIKGILITSDISHGMPYLPLEKQNNQVNEALKLANQLIPSA
ARDVEDTQIILTKEKIITDEPRFLCQFSRDILPVLIKAVNSGANSYICYGCASIVNNIFY
FSEPEILQELLKETNIPSFLAGLLSRKDHHVLTSSLKIIEILMQKLPDAYLGFFIKEGVV
NAVEALLNQEDCSKSTHLPDDMQQPETQPVIRNKTTCFCYAFDTCRSEAAEKRTCRIGKD
SLFTFARHVKTTYFTKDVVSSEMGLTEILQKLKTCCAVLNETTDKSSEQCNLQNEEYLST
ILSEVMMELHGGETMTTFEFLESGLVKSLSNYLSNGKYLQVENNMNCSSDHFLAVVKRFQ
SFARMFFSRMGQGWGDMLLTLLVRKLQNALTSLDNFPVIMSHNFKPRSSISDIPMRHSTI
TPCIRVRFKKDEDETNLSSYDSAVNVEISSSLLTIEEFLWPKVSIDVNSQKAESPPSGTA
LESKYSDDDSQERDSTPSQKADSPSEGLTCENRNPPVETSPKQGTSSSGQAERNTTILSD
NTVQQKLVFSLNGKELDRSVTLYQSILQDQINAGSDIILDMQFWRSVHDITFRAANPEAN
RTAVNLEANDSPRHSSTAMSSINENITGFTWQMLPFFSSMLLGKLPCKLDRSGPSYDILF
MLHILEGLSRYSFHLVSDERNRFFAHGRITNLDDLKAEVFSIPQQEFVSAKLTDKLEQQM
HDPLVSKSCCLPLWCIELMSACPFLFSFEARWKYFQLTAFGSLKNHHGHMMGASVNSVAE
RASSHSRKKFKVDRNDILVSAAKMMKSHAKSNALLEVEYKEEVGTGLGPTMEFYTLISHE
FQKSGLGMWRGELPCESGTNDAHVSGFVVAPNGLFPRPWSASADSASFQEVSERFHLLGL
VVAKAITDNRILDIPFSKAFYKLILGQELNIYDIQSFDSELAISLVEFQALACRRKYAES
NLTRDCQIISDLTYRGCRIEDLAIEFALPGYPEYVLSSGSRSDSLNAENLEEYVRHVVDA
TVKSGIARQMEAFKSGFNEVFPLKKLQVFSEDELERLLCGEQDTWDFAKLVDHIKFDHGY
ASSSPPVISLLEIIQEFGSLERRAFLQFITGSPRLPPGGLAALNPKFTVVRKHNSNDADN
DLPSVMTCANYLKLPPYSSKEKMREKLLYAITEGQGSFHLS
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgcaggaagcggcccgactccgaccccgagggctgcagcgagcccgagccc
cccgccgataagcgcccgtgcacggcggaaccctcgacttccgccgccgcggccgcggct
gccgctgctcctccgcccggcgcgctccaggctgagcagggcggctcggatatggacacc
tcgtcgtccggccaccccggcgatgatgatgtcgacgcggatgacggagacggcgatggc
gatggcgatggggatggagatggagatggggggtcgtcgtgcgagtcggatggggacggg
agcccgaggccgcgcggcagcgggggcgggaggttccagcggatggtggacgcggtggca
gacgagggcgcggggcaggacgcggtggtggcggcgctcatggagctctgcgaggcgctg
tcgttctgcgaggaggacgccggcgggtacttccccacggaggcagccgcgcgggcgctg
gtgcggcgggccggcggcggcggcgatggcacgggggctaccccggacgtgattctcctg
tccgtgcgcgccatcacgtacctctgcgacgccatgccgcgcgccggggacgccgtcgtc
cgccacggcctcatccccgtgctctgctcccggctgctagccatcgagtacctcgatgta
gctgagcagtgcttgcaagcttttgagaagatatcacggcggcagcctacccagtgcttg
caggcgggcatgatcaacgctgtgctggcatacattgacttcttcgctgcaagcattcag
agggttgcagtgtcagctgtcgcaaatgcctgcaaaaaggtcccggaagattgctcccag
tttgttctggattcggtcccaactctctgtaatcttctgcaatctgaggacaaaatgata
gtggagaaggttgcagcttgcttgataagcatcgtggactcctttagcacttcagttgat
cttgtggaccagctctgtcaccagggtgttatagagaaggtcctacctttgatccacact
ggtggactcacggcccttagcccatcaacatgcagtaatctgattgggtttcttgctaag
ctagcctgtacttcacttgtggcagtgaagtctctatttgagctgggtgttagtagcaca
ataaaggggattttgatcacttcagacatctcccatggcatgccatacttgcctctggaa
aaacaaaacaatcaggtcaatgaagctctgaaactagcaaaccagttgattccttcagca
gcaagggacgttgaagacacccagatcatactaacgaaagaaaaaataattacagacgaa
ccaaggttcttgtgtcaattctccagggatattcttcctgtcttgatcaaggcggtgaac
tctggtgccaattcatacatttgctatggatgtgcttcaatcgttaacaatattttttac
ttcagtgaaccagaaatacttcaagagttgctcaaggaaacaaacataccgagcttcttg
gctggtttattgtctagaaaggatcatcatgtgctgacctcatcactaaagataatcgag
attctcatgcaaaagcttcctgatgcataccttggcttctttatcaaggaaggtgttgtc
aatgcagttgaggcacttcttaatcaagaggattgctcaaaatccactcatctgcctgat
gacatgcaacagccagagactcaacctgtcataagaaataagactacatgtttctgctat
gcatttgatacctgtagatctgaagctgccgaaaaaaggacttgtaggattgggaaggac
agtctttttacttttgccaggcatgtgaaaacaacctactttactaaggatgtagtgagt
tctgagatggggttaactgagattttgcagaaactcaaaacttgctgtgcagttttgaat
gagaccacagacaagtcatcagaacaatgcaatcttcagaatgaagaatacttatctacc
attttaagtgaggtgatgatggagcttcatgggggagaaacaatgacaacctttgaattc
cttgagagtggattggtcaaatctttatcaaattacctctcaaatggcaagtacctccag
gtggagaacaatatgaattgcagctctgaccattttttggctgtggtgaaaagatttcag
tcatttgctcggatgtttttctcaagaatgggccaaggttggggtgacatgctcttgaca
cttttagtaaggaagctgcagaatgctcttacttctcttgacaactttccagttataatg
agccacaacttcaagccaaggagcagtatttctgatatccctatgaggcactcaacaatt
actccatgtatccgagtaagattcaagaaagacgaagatgaaactaacttgtcaagctat
gatagtgctgtgaatgtggaaatatcgtcatccttgcttaccattgaagaatttttatgg
cccaaagttagtatagatgtcaatagtcagaaggctgaatcaccacctagtggcactgct
ttggaaagcaaatattctgatgatgactcccaggaacgagattccacacctagtcagaag
gctgattcaccatcagagggcctgacttgtgaaaatcggaatccacctgtagaaacaagt
ccaaagcaaggaacttcatcttctggtcaagcagaaaggaacacaacaatcttgagcgat
aataccgtacaacagaaattggtatttagcttaaatgggaaagagcttgaccggtctgtt
actctgtatcagtcaatcctgcaggatcagatcaatgcagggtctgacataattctggac
atgcagttttggcgcagtgttcatgacataactttcagagctgctaacccagaagcaaat
agaacagctgtcaacctcgaagcaaatgattctcctagacattcctctactgcaatgtca
tcaataaatgagaacataactgggtttacatggcagatgctcccattcttttctagtatg
ttgcttggtaaacttccgtgcaaactcgacagatcaggtccttcgtatgacatattgttt
atgttacacattttagagggattaagcaggtattcttttcacctcgtgtctgatgagaga
aaccgtttttttgcccatggaaggataactaacctcgatgatctgaaagctgaagttttc
tcgattcctcagcaagagtttgtcagtgccaaattgacagataaattggagcaacaaatg
catgatccattagtttcaaagtcttgctgcctgcctttatggtgcattgaattgatgtct
gcatgccctttcttattttcatttgaggcgagatggaagtatttccagctgacagcattt
ggttctctgaaaaatcatcatggccatatgatgggtgcaagtgttaacagtgttgcagaa
agggcgtcttcccactcacggaaaaagttcaaagttgatcgcaatgatatactggtttca
gctgcaaaaatgatgaagtctcatgctaagagcaatgctctactagaagtagaatataaa
gaggaagtgggcactggtttaggtcctacaatggaattctatacattgataagtcatgaa
tttcagaagtctggtctaggcatgtggagaggggagcttccttgtgaatctggtaccaat
gatgctcatgtttctggattcgtggttgcccctaatgggcttttccctagaccttggtct
gcttctgcagattctgcttcctttcaagaagtgagcgagcgattccacttacttggtctg
gttgttgcaaaagcaattacagacaacagaattctagacattccattttctaaagcattc
tacaagcttatccttggacaggagcttaatatatatgatatccagtcatttgattctgaa
ctggccatatcccttgtggagtttcaagcgcttgcttgtcggagaaaatatgcagagtca
aatttgacaagggactgccagattatatcagatttgacttatcgaggttgtagaattgag
gatcttgctattgagtttgctctcccagggtatccagaatatgtgctctcatcgggaagc
cgctctgacagtttgaatgctgagaatttggaagaatatgttcgtcatgttgttgacgca
acggttaaaagtggaattgcaagacagatggaggcttttaagtcaggatttaatgaggta
tttccactaaaaaaactccaggttttctcagaggatgagctagagagattactctgtggt
gaacaagatacatgggattttgcgaaacttgtggatcacatcaaatttgatcatggttac
gcttccagcagccctcctgtcattagtttgctggaaatcatacaggagtttggatccctt
gaacgcagagctttcttgcaatttataacgggttcacctcggcttccaccaggcggcttg
gctgcactaaatccaaagttcacagttgtccgaaagcataacagcaatgacgctgacaat
gacctgcctagcgtgatgacttgtgccaactatcttaagttacctccgtactcttcaaag
gaaaagatgagggagaaacttctctatgcaattacagagggccaggggtccttccaccta
tcttaa
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integrated database retrieval system
