Miscanthus floridulus: 136514969
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Entry
136514969 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin-conjugating enzyme E2 24
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136514969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136514969
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
136514969
Ubiquitin system [BR:
mflo04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
136514969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
RWD
Motif
Other DBs
NCBI-GeneID:
136514969
NCBI-ProteinID:
XP_066364763
LinkDB
All DBs
Position
17:complement(98605837..98614135)
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AA seq
871 aa
AA seq
DB search
MDLFAIDSDSESYTGTSDSEDQECEFTYSDHAQNILSSLDESIGKIDNFLTFERGFLHGD
IVCPVSDPSGQLGRVVGVAMFVDLETSSGDIIKDVNSKELSRVRSFVSGDCVVMGPWIGR
VIRAFDLVTLLFNDGAKCEILLRDSDVLKPVPPILFEDAPYFYYPGQRVRIVDPSVSKSA
TWLCGSWRPSRDDGIVSHVDVGLVHVNWITSVTNVWGDKSSSPPNIQDPKKLTLLSCFPY
ANWQLGDWCALMADNNGCLWMDSGKSCILSEDHKCDTHGHMYFESYGSDCSQTYVVAKTK
STVDVLWQNGTVSLGLEPQALVPVSTLGDHDFWPGQFVLEKLTVEDAARCQRTAIVRDVD
ALERTVNVKWIGPAHSDTVGYGSDPAVETVSVYELIEHPDFSFCTGEVVIRSAVNIDNSE
ADLTNGSLASKESLVTSSGFLSCIGNVLGYKDNGIEVQWANGVISKVQHFEIIGLDRLLD
NSSLESMNEEHTIGDSLDEAEQEEMHHKIALESTEDCTGSLCKATAFLFPKTAFDFLTNV
AASLFGTHGSPSPSSVLVDPRYEIVKMAEMQPCVEELPKEKQIVKFVAQIEKPILSSEDT
ISKRFDVVTDCLDHHFVKENGHESVSRGWLKKVQQEWSILQKDLPDGIHVRVYEERMDLL
RACIVGAAGTPYHDNLFFFDIFFPPDYPHEPPSVHYHSGGLRLNPNLYESGKVCLSLLKT
WTGTGNEVWNAENSTVLQLLLSLQALVLNEKPYFNEAGYDKFVGKADGEKNSITYNENAF
LLSCQSMMYVLHKPPKHFEKLVKEHFTCRAPLILDACEAYLGGDLVGHAHDKAYISEDGS
KNCSTGFKIMLGKLLPKLVTAFREAGITSDP
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtttgcaattgactcggatagtgagtcatatactgggaccagtgacagtgaa
gaccaagaatgtgaatttacatatagcgaccatgcccaaaacatcttgtccagcctggat
gagagcattggcaagattgataattttctgacttttgaaagggggtttctgcatggggat
atagtctgccctgtttctgatccctcaggtcagctgggacgtgttgtcggggtggcaatg
tttgttgatttggagactagctcaggtgacataattaaagatgtaaacagcaaggagcta
tcaagagtgagatcttttgtttctggtgactgcgttgttatggggccatggattggacga
gtgatcagagcatttgatcttgtcacacttttgttcaatgatggagcgaagtgtgaaatc
ctgttaagggattcggatgtactgaagcccgttcctcctattctttttgaagatgcacct
tacttttattatcctggccaacgtgtgaggatagtcgatccatcagtttccaagtcggca
acatggttgtgtggatcatggaggcccagtagagacgatggtattgtctctcatgttgat
gtagggctggtgcatgtgaactggatcacatctgtgaccaatgtttggggagataaatca
tcaagtcctccaaacattcaggacccaaagaagctcacattgctgtcatgtttcccttac
gctaattggcaactaggtgattggtgtgctcttatggccgacaacaatggatgtctctgg
atggattctggcaagtcttgtattcttagtgaagaccataagtgtgacactcatgggcac
atgtatttcgaaagttatggttcagattgttctcaaacatatgttgttgccaagacaaag
agcactgttgatgttctgtggcagaatggaactgtatctcttggtctagaaccccaggca
ttagtccctgtgagtacccttggtgaccatgatttttggccaggtcaatttgtcctagaa
aaactgactgtagaggacgctgcaagatgtcagcgaacagcaatagtgagagatgtggat
gcactggagcgaacagtaaatgtaaaatggattggtccagcacatagtgacactgtcggc
tatggaagtgaccctgcagtggagactgtaagtgtttatgagctaatagagcacccagat
ttctccttctgcactggtgaggtcgttatcaggtcagctgtgaacatagacaactctgaa
gcagatctcacaaatgggtcattagcaagcaaagaatcattggttacctcctctggcttc
ttatcatgcatcggaaatgtacttgggtacaaggacaatggaatcgaagtgcaatgggct
aatggtgtgatatccaaggtgcagcattttgagataattggactggacaggcttcttgat
aatagttctctagaatcaatgaatgaggaacatacaattggtgattcgctagacgaggct
gagcaggaggaaatgcaccataagattgctctggagtctactgaagactgcactgggtcc
ttgtgcaaagccactgcttttctatttcccaagacagcttttgacttcctgacaaatgtg
gctgctagtttgtttggtactcatggttctccatctccaagctcagttttggtagatcct
cgatatgaaattgtgaagatggcagaaatgcagccatgtgtagaagaattgccaaaagaa
aaacagatagtgaagtttgtggcgcagattgagaagccaatcctctcttcagaagatacc
atctcaaaaagatttgatgtagtcactgactgtttggatcatcattttgtgaaggaaaat
ggccatgaaagtgtttcaagaggttggctgaagaaggtgcaacaggaatggagcatcctg
caaaaggatctaccagatggtattcatgtgagagtttatgaggaaaggatggatcttctg
agggcttgcattgttggggcagctggaacaccttatcatgacaatctttttttctttgat
attttctttcctcctgactatccccatgaaccaccttctgttcactatcactctggtggt
ctccgtttgaatccaaatttgtacgagtcaggaaaagtatgtctcagcctcctgaagaca
tggacaggaactggtaatgaagtgtggaatgctgagaactcaactgttcttcagctgttg
ttatcgcttcaggctcttgttctcaatgaaaaaccttatttcaatgaggcgggatatgac
aaatttgtgggtaaggctgatggagagaagaactccatcacgtacaatgagaatgctttc
ctgttgtcatgccaatccatgatgtatgttttacacaagccaccaaagcattttgagaag
ttggtcaaggagcatttcacttgtcgtgccccgctcattctggatgcatgcgaggcttat
cttgggggtgatctcgttggacatgcgcacgacaaagcatacatatcagaggacggcagc
aagaactgttcaaccggtttcaagataatgcttggtaagcttctaccgaagcttgttact
gccttccgtgaggctggtatcaccagtgacccgtaa
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