Miscanthus floridulus: 136516351
Help
Entry
136516351 CDS
T10264
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136516351
03420 Nucleotide excision repair
136516351
03430 Mismatch repair
136516351
03440 Homologous recombination
136516351
03460 Fanconi anemia pathway
136516351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136516351
03032 DNA replication proteins [BR:
mflo03032
]
136516351
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136516351
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136516351
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
136516351
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
136516351
MMR (mismatch excision repair)
136516351
DSBR (double strand breaks repair)
HR (homologous recombination)
136516351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF223
zf-CCHC_2
DUF936
Fer4_9
Motif
Other DBs
NCBI-GeneID:
136516351
NCBI-ProteinID:
XP_066365829
LinkDB
All DBs
Position
17:complement(8303005..8307121)
Genome browser
AA seq
916 aa
AA seq
DB search
MAAQLTPGAVAAISEHADGGNGTLQPVLQVVDVRIVPNVKGPTNHERFRMLLSDGVHTMQ
SMLATAENVLIHNGSIKKGSIIHLHEFTCSTIQNRRIIIIIKLDVLQSECTIIGDPKAYD
VRIQPNEQGTNFAANAAQANTGTYSSGPGMLGSSAAPRPLQDANNVPYGSSAAPRPVQDA
NNVPYGSSAAPRPVQDANNVPYGGSYGGYQGTVGPPIGRAVESVPNVASGVSYGTTSAHN
NTMNVGMVQSNLQQPSLNSHQNQRFAVPSMAGGSGAPGNTYGQPAQSFYQQPPPGHMNRT
PVSKNDASRLVPVAHLNPYQYTWTIKARVTAKTDLRHYNNNKGAGKVFSFDLLDGQGGEI
RATCFNAQADQFFDLIEVDKVYLISKGSVKPARKQFNSLNHEYEITLDFKSSIEVCVDDD
SNIPRQQYNFRQISEIENLEAGAIVDLIGILTSVGPSATIIRKVGGSEAQKRTLQLKDMS
GRSVEITLWGKFCDAEGQQLQLQCDSGLNPVLALKGARVTEFSGRSVNTIGSTQLKIDPD
FPEAESLRRWYATEGKTAACVSLSGVSMGRTDVRKAVAQIKDEDLGRSEKPDFITVKGAI
SHLITDNFCYPACTMEVNGRVCNKKVINNGDGTWQCDKCDQSLPKCEYRYLLQCQIQDHT
GVTYATAFQEAGIEIVGHSAYELYNIREEDPERFAEILQGVRWQQFLFKLKVKEETFNDE
QRVKCSITRAEKLDPAKESSYLLGVINGLLQDDTGSPSEAQGAMAYNAGLSNTGAGRSVP
TSNSAYTTNMSGPIYGESANQFAQQANTYIGVPTPVSVTGNVHTCMSCGSSGHNAQNCPA
GMYRQQPAVRTASSYGSSQPRNAGPRPCFKCNQIGHFASSCPLLAPAPQQQQQYRSGGAS
SGGYGQQQPYLGATNY
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagctgacgcccggcgcggtggcggcgatctcggagcacgccgacggcggc
aacgggacgctgcagccggtgctgcaggtggtggacgtgcggatagtccccaacgtcaag
ggccccaccaaccacgagcgcttccggatgctgctctccgacggcgtccacacgatgcag
tccatgctcgccaccgccgagaacgtgctcatccacaacggctccatcaagaagggctcc
atcatccacctccacgagtttacctgcagcaccatccagaaccgcaggatcattattatt
atcaaacttgatgttctgcaaagcgagtgcaccataattggagaccccaaagcctatgat
gtgagaatccaacctaatgagcagggcaccaactttgcggccaatgctgctcaagctaat
accggaacatattccagtggccctggtatgctgggatcttctgctgctccaaggccattg
caagatgctaataatgtaccatacggatcttctgctgctccaaggccagtgcaagatgct
aacaatgtaccatacggatcttctgctgctccaaggccagtgcaagatgctaataatgta
ccatacggtggatcctatggtggttatcagggtacggtgggccctccaattggtcgtgca
gtagaatctgttcccaatgtggcatctggtgtctcttatggtacaacttcagcacataat
aatacaatgaatgtgggcatggtgcagtcaaacttgcagcagccttcactgaactctcac
cagaaccaaaggtttgcagttccttccatggctggtggcagtggtgctcctgggaataca
tacggccaacctgcacagtccttttatcagcaaccgcctccagggcatatgaatagaacc
cctgtgtctaagaatgatgcaagtcgtcttgtcccagtggctcatttgaacccctaccaa
tacacatggacaatcaaggctagggtgactgcaaagactgatctcaggcactacaacaac
aacaaaggtgctggaaaagtcttctcctttgatctccttgatggacagggtggagaaatc
cgtgcaacatgcttcaatgcgcaggctgatcagttttttgacctcattgaggttgataag
gtgtacctgatatctaaagggtcggtgaaacctgcaaggaagcagtttaactctttgaac
cacgagtatgaaataactctggatttcaaatcatctatcgaagtttgtgttgatgatgat
agcaacatccctaggcagcagtataatttccggcagatcagcgaaattgagaaccttgag
gcaggtgctattgtggacttgattggaattcttacatcagttggcccttctgccacaata
atccgaaaggttggtggctcggaagcccagaaaagaactcttcaactgaaagacatgtct
ggtcgaagcgtagaaattaccttatgggggaagttctgtgatgctgaaggccagcagctg
cagttgcagtgcgattctggtttgaatcctgttctagctttgaaaggtgcccgggttact
gaattcagtggtagatctgtgaacacaatcggctcaactcagttaaaaatagacccagac
tttcctgaggctgagagtctgcggcgatggtatgcaactgaagggaagacagctgcttgt
gtttctttgtcaggggtaagtatgggcaggactgatgtcaggaaagcagtggctcagatc
aaggatgaagatctggggcgatcagagaagccagactttatcactgttaaaggtgcaatt
tcacatctgatcactgataatttttgttatcctgcttgcaccatggaggtgaatggtagg
gtgtgcaacaaaaaggtaataaataatggtgatgggacatggcaatgtgacaaatgcgac
cagagcttaccaaaatgcgagtatagatacttgctgcagtgccagatccaggaccacact
ggggtcacctatgctactgcattccaagaggctggtatcgagatcgttggccacagcgcc
tacgagctctacaacataagagaagaagacccagaacgatttgctgagatcttacagggg
gttcgctggcagcagtttctattcaagctgaaagtcaaggaagagacctttaatgatgag
cagcgtgtcaagtgcagcattacgagagcggagaagctggatccagcaaaagagagttct
taccttctgggggtaatcaatggcctattgcaggatgatactggctcaccttctgaggcg
caaggcgccatggcctataatgctggtctcagcaacactggtgctggacgaagcgtgcca
acctccaacagtgcctacaccaccaatatgagtggtccaatatatggggagtccgcgaac
cagttcgcgcagcaagcaaacacgtatatcggggtgcccactccagtgtcggtgacaggg
aatgtgcacacctgcatgtcttgcgggtcaagtgggcacaacgcgcagaactgccctgca
ggcatgtacaggcagcagcctgctgtgagaacggcaagctcctacggctcttcgcagcct
cgtaacgctggccccagaccgtgtttcaaatgcaatcagatcgggcactttgctagctct
tgcccactgctggcccctgccccccagcagcagcagcagtatcggagcggcggcgcttcg
tcaggtggttatggtcagcagcagccctatcttggggctaccaactactga
DBGET
integrated database retrieval system
