Miscanthus floridulus: 136516554
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Entry
136516554 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136516554
04121 Ubiquitin system [BR:
mflo04121
]
136516554
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136516554
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
136516554
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136516554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4
zf-RING_5
zf-C3HC4_3
Zn_ribbon_8
CxC4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
136516554
NCBI-ProteinID:
XP_066366073
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All DBs
Position
17:6978777..6980448
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AA seq
400 aa
AA seq
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MATPSSPSPSRSPSSSYWCYQCDRFVRAAAAPASPSPACPSCGGGFLEEMGAPPPRAAYL
RRPRAHHHVAADLRLRRARRGTSGGADSRASPFNPVIVLRRSPPTATTDAADGSSSPTAA
ANTGGSSFELFYDDGAGSGLRPLPDSMSDFLMGSGFERLLDQLAQIEAGGLAAARARDAP
PASKAAVESMPVVSVGADYVAADAHCAVCKEPFELGAEAREMPCAHIYHADCILPWLALR
NSCPVCRHEMPTDATAAAGATNTGEEETTVGLTIWRLPGGGFAVGRFAGGRRPEERELPV
VYTEMDGGFNSGGAPRRISWGSRQAASTDRGTVRRFLRNVFACFGGRGHGASSSASRSHA
MPELNDDDASDHSAAFSHGSRSRSTSWRLEDGHADAMVQR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccctcctccccctccccctcccgctccccgtcctcctcctactggtgctac
cagtgcgaccgcttcgtgcgcgccgccgccgctcccgcctccccatcccccgcctgccct
tcctgcggcgggggcttcctcgaggagatgggcgcgccaccaccacgcgcagcctacctc
cgccgcccccgcgcgcaccaccacgtcgccgccgacctccgcctccgccgcgcccgtcgc
ggcactagcggcggcgccgactcccgcgcctcgccgttcaaccccgtcatcgtgctccgc
cgctcccctcccaccgccaccaccgacgccgcagacggctcctcctcccccaccgccgcc
gccaacaccggcgggagcagcttcgagctgttctacgacgacggcgcggggtcgggcctg
cgcccgctgcccgacagcatgtcggacttcctcatggggtcgggattcgagcgcctgctg
gaccagctggcgcagatcgaggcgggcgggctcgcggcggcccgcgcccgcgacgcgccg
ccggcgtccaaggccgccgtcgagtccatgcccgtggtctccgtcggcgcagactacgtc
gccgctgacgcgcactgcgccgtctgcaaggagcccttcgagctgggcgccgaggccagg
gagatgccctgcgcgcacatctaccacgccgactgtatcctcccctggctcgccctccgt
aactcctgccccgtctgccgccacgagatgcccaccgacgccacggccgccgctggcgcc
accaacaccggggaggaggagactacggtcgggctcaccatctggaggctccccggcggc
gggttcgcggtcgggaggttcgccggcgggcggaggcccgaggagagggagctccccgtg
gtgtacacggagatggacggcgggttcaacagcggcggcgcgccccggcggatctcgtgg
gggtccaggcaggccgcgtccacggacaggggcaccgtccgccgcttcctccgcaacgtc
ttcgcctgctttggaggacgcggccatggtgcgtcgtcgtcggcgtcgcggtcgcacgcc
atgcctgagctcaacgacgacgacgcgtctgatcatagcgcagcgttcagccatgggtcc
aggagccggagcaccagctggaggctcgaagacggccatgccgacgccatggtgcagaga
tga
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