KEGG   Miscanthus floridulus: 136516564
Entry
136516564         CDS       T10264                                 
Name
(RefSeq) pre-mRNA splicing factor SR-like 1
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
mflo  Miscanthus floridulus
Pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136516564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mflo03041]
    136516564
Spliceosome [BR:mflo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    136516564
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    136516564
SSDB
Motif
Pfam: PRP38 PRP38_assoc Bee_toxin
Other DBs
NCBI-GeneID: 136516564
NCBI-ProteinID: XP_066366087
LinkDB
Position
17:32966758..32971176
AA seq 421 aa
MEIQTSGKPIDVLMEKVLRMNILSSDYFKELYRLKTYHEVIDEIYNTVEHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHLDSPYIRAIGFLYLRYVADPKVLWTWYEPYLR
DDEEFSPGSNGRKTTMGVYVRDLILGQYYFDSLLPRIPLPVSRQITANLEKMKLPTKLSG
ATGDSSRQGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTVTHDDHRRSYSPS
RRSGSREGPDHDRSDRELDRSSRDRDRDRDRSSRDRYRSSRDLDRDKDVRDYRRHERESR
DREYYRSRRSEERQDGRRDRESSRHRRSSSHHRSRSRSRSRSQSRRSRSRSRSRSRSRNE
QRSSPFRDANKEKAATVLSNLAKLKDLYGDITEKKEDSDAEKLHRDSCAEEVIRLGGPRW
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggagatacaaacttcagggaaacccattgatgtgctgatggagaaggttcttcgcatg
aacattctgtcttctgattactttaaggagctctataggttgaagacctatcatgaggtc
atcgatgagatctacaacactgttgaacatgtggagccttggatgactggcaattgcaga
ggcccctccactgcattctgtcttctatacaagttcttcaccatgaagcttactgtcaaa
cagatgcacggtttgttgaagcatcttgactccccatacattagagctattggtttcttg
tatcttcggtatgttgcagacccaaaggttctgtggacgtggtatgagccctatttgagg
gatgatgaggagttctcccctggatctaatggccgcaagacaaccatgggtgtttatgtg
cgtgatcttatacttggacagtactactttgatagtcttctaccaagaattcctctccca
gtgagtcgtcagattacagccaatcttgagaagatgaaattgcccactaagctttctggg
gcaactggagactccagtcgtcagggatcagaagatactgcacgtcgtcctccttcagtg
aaagcttctctgtcggtttcctttggacagcgtgctccacatcgggcttccaccagagat
tcatccccagttcggcgaacagtcacccatgatgatcatcgaagatcatactcaccatct
cggcgcagtggtagccgtgagggtcctgaccatgatcgttctgaccgagaactggatcgt
tctagtcgtgaccgtgacagagaccgagaccgttcaagcagggaccggtatcgttcaagc
agggaccttgaccgtgacaaggatgtcagagattatcgtcgccatgagcgtgaaagcagg
gatcgtgagtactacaggtccaggcgttcagaagaaagacaggatggcagaagagatcgt
gaaagtagcaggcacaggcgctctagctctcaccacagaagcagaagtcgtagtcgaagc
aggagccagagcaggaggagccgaagccggagccggagccggagtcggagcaggaatgag
cagcgatccagcccattcagggatgcgaataaagagaaggcagccactgtgttaagcaac
ctagcaaagctgaaggacttgtatggtgacataactgagaagaaggaagacagtgatgct
gaaaagcttcaccgtgattcatgcgctgaggaggtcatcagactgggaggccctcgatgg
aggtaa

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