KEGG   Miscanthus floridulus: 136516574
Entry
136516574         CDS       T10264                                 
Name
(RefSeq) replication factor C subunit 5-like
  KO
K10756  replication factor C subunit 3/5
Organism
mflo  Miscanthus floridulus
Pathway
mflo03030  DNA replication
mflo03410  Base excision repair
mflo03420  Nucleotide excision repair
mflo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    136516574
   03410 Base excision repair
    136516574
   03420 Nucleotide excision repair
    136516574
   03430 Mismatch repair
    136516574
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mflo03032]
    136516574
   03036 Chromosome and associated proteins [BR:mflo03036]
    136516574
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136516574
DNA replication proteins [BR:mflo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    136516574
  DNA Replication Termination Factors
   ELG1-RFC complex
    136516574
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    136516574
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     136516574
  Check point factors
   HRAD17(Rad24)-RFC complex
    136516574
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 Sigma54_activ_2 AAA_22 DUF815 AAA_16 RuvB_N RsgA_GTPase Mg_chelatase AAA_24 ABC_tran AAA_29 AAA_2 AAA_5 AAA_11 nSTAND3 ATPase_2
Other DBs
NCBI-GeneID: 136516574
NCBI-ProteinID: XP_066366104
LinkDB
Position
2:complement(9302532..9307091)
AA seq 354 aa
MLWVDKYRPKTLDKVTVHDQVAQNLRKLVSEQDCPHLLFYGPSGSGKKTLILALIKQMFG
AGAEKVRLENKTWKIDTGTRTLEIELPMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKN
RPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSR
CLNVRVNAPSEDQIVQVLEFIGKKENLHLPAGFAARIAAQSNRNLRRAILFFETCKVQQY
PFTSNQVAPPLDWEQYVSEIATDILTEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAE
LLRKLDADLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtagacaagtaccggccgaaaaccctagacaaggtcaccgtccacgaccag
gtcgcgcagaacctcaggaagctcgtgtcggagcaggattgcccgcacctgctgttctat
gggccgtcggggtccgggaaaaaaaccctaatcctcgcgctcatcaagcagatgtttggc
gccggtgcggagaaggttaggctggagaacaagacatggaaaatagatactggaacaagg
acacttgagatagaattgccgatgttgtcaagtgctcaccatgtggagatgaaccccagt
gatgctggctttcaggacaggtatgttgtccaggaggtcatcaaagagatggcgaagaac
aggccaattgatgccaaaggcaagagagcatttaaagtccttgtgttaaatgaagttgac
aagctctcacgagaagctcagcattccctccgcagaactatggaaaagtatagctcatca
tgcaggctgatcctatgctgtaacagctcctcaaaagtgacagaggctgtaagatcccgt
tgcttaaatgtgcgagtaaatgcacccagcgaagatcagattgtccaagttctagagttc
attgggaagaaagaaaacctgcatcttccagctggatttgctgctcgtatcgcagcacaa
tcaaaccgtaatcttaggcgggcaatactgttttttgagacttgcaaagtgcaacaatac
ccatttacatcaaatcaagtggcgcctcctcttgattgggagcaatatgtgtctgaaata
gcaactgatatactgacagaacaaagccctaaaaggctatttgctgtacgtcagaaattc
tatgaattactcgtcaattgcatcccacctgaaagtattttgaagaaattgttggcagaa
ttattgaggaagttagatgctgatctgaaacatgaaatctgtcactgggctgcacactat
gagcacaagatgcgccttggatcaaaggccatttttcatctagaagctttcgtggccaag
ttcatgagcatttacaaggagttcctggtggctacatttggttga

DBGET integrated database retrieval system