Miscanthus floridulus: 136516601
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Entry
136516601 CDS
T10264
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136516601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136516601
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136516601
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136516601
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136516601
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
136516601
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
136516601
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP60 / Chaperonin
136516601
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
136516601
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136516601
Exosomal proteins of other body fluids (saliva and urine)
136516601
Exosomal proteins of breast cancer cells
136516601
Exosomal proteins of colorectal cancer cells
136516601
Exosomal proteins of bladder cancer cells
136516601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-GeneID:
136516601
NCBI-ProteinID:
XP_066366136
LinkDB
All DBs
Position
17:57458856..57463148
Genome browser
AA seq
478 aa
AA seq
DB search
MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQ
GLIQELENKARPVKGGGDIKAVASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFET
TVEVEEGMEIDRGYISPQFVTNLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRA
PLFIIAEDITGEALATLVVNKLRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDL
GLLVENATEEQLGTARKVTIHQTTTTLIADAATKDEIQARVAQLKKELAETDSVYDTEKL
AERIAKLAGGVAVIKVGAATETELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTI
VPSIKEKIEDPDERLGADIIQKALVAPASLIAHNAGVEGEVVVEKIKDSVWEVGYNAMTD
KYENLIEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKPQAAEAAEGSLAV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgctggtgcagcattgattcgtgaggttgctagcaagaccaatgattctgct
ggtgatggcactacaactgcttccgtccttgctcgtgaaatcatcaagcttggccttcta
agtgtaacgtctggtgcaaatcctgtgtcacttaagaagggaatagacaaaactgtgcag
ggtctaattcaggagcttgagaataaggctagaccagtcaagggtggtggtgatatcaaa
gccgttgcatctatctctgctggcaatgatgaatttatcggatccatgattgctgaagca
attgacaaagtggggcctgatggtgttctatcaattgaatcctcctcatcttttgagact
acggttgaagttgaagaaggaatggagattgaccgcggttatatttccccacaatttgtg
acaaacctggagaaatctattgtggagtttgagaatgctaaggttcttattactgatcag
aagatcacaagcataaaggaaattcttccgattttggagaagaccacacagctgagagcc
cctttgttcattattgctgaggacattactggtgaagctttggcgactcttgttgttaac
aagcttcgaggaattctcaatgttgcagcgattaaggctccaagctttggtgagcggcgg
aaggctgtacttcaggacattgccattgtcacaggtgctgagttcctagcaaaagatctt
ggtttgttggttgaaaatgctacagaggaacaacttggtacagcaaggaaagtcacgata
catcagactacaacaaccctcatagcagatgcagccactaaagatgagatccaagcgagg
gttgcacagctaaagaaggagcttgctgagactgattcagtttatgatactgagaaattg
gctgagagaattgctaagcttgctggtggtgttgctgttatcaaggttggagctgcaact
gagactgagcttgaggaccgccagctaagaattgaggatgcaaaaaatgccacttttgca
gctatagaggagggcattgttcctggaggtggaacggcatacgtgcacctatctaccatt
gtcccttcgatcaaagaaaaaattgaggaccctgatgagcgccttggtgctgatattatt
caaaaggcattggtagcacctgcttcattgatcgcacacaatgctggagtagagggcgaa
gtggttgttgagaagatcaaggacagtgtgtgggaggtgggctacaatgcaatgacagac
aagtacgagaacctgattgaggccggtgtgatcgaccctgctaaggtgactaggtgtgca
ctccagaatgcggcctcagtagctggaatggtcctaaccacacaggcaattgttgttgag
aagccaaagccgaagcctcaagcggcagaggcagcagagggaagccttgccgtgtaa
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