Miscanthus floridulus: 136516927
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Entry
136516927 CDS
T10264
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136516927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136516927
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
136516927
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Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
Motif
Other DBs
NCBI-GeneID:
136516927
NCBI-ProteinID:
XP_066366527
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Position
17:73521739..73526229
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AA seq
395 aa
AA seq
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MVSGRPGNGELDAWFKGLMVTSSSEREQDGSGGPVPTLSGWKDLPMELLVRIISTVGDDR
MVIVASGVCTGWRDALGWGVTNLSLTWCKQSMNNLMISLAHKFTKLQVLTLRQNKPQLED
SAVEAVANYCHDLRELDLSRSFRLSDRSLYALAHGCPWLTRLNISGCSNFSDTALIYLTC
RCKNLKCLNLCGCVKAATDRALQVLFVISSFANHVSSMNVYLVSIILMQVIAQNCGQLQS
LNLGWCDDVTDKGVTSLASGCPDLRAVDLCGCVLITDESVVALANGCPHLRSLGLYYCQN
ITDRAMYSLANSRVKSKRGRWDAVKDGLANLNISQCTALTPPAVQAVCDSFPALHTCSER
HSLIISGCLSLTSVHCACALHPHRAGRALMANHAY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgggaggcccgggaatggtgaattggatgcatggttcaagggcctcatggtg
acctctagcagcgagagggagcaggatggaagtggtggtccagtgccaacattatcagga
tggaaggaccttccgatggagctcctggtgaggataatatcgactgttggagatgatagg
atggtcattgtggcatctggtgtttgcaccggctggcgtgacgctctgggatggggggtc
actaatctttcccttacatggtgcaaacagagcatgaataatttaatgatatctcttgca
cacaagtttacaaagttacaagttctcactcttcgtcaaaacaaacctcagcttgaagac
agtgcagtagaggctgttgccaactactgtcatgatctacgtgagttagacctcagcaga
agcttcagacttagtgaccgctccttgtatgcattggcccatggatgcccatggcttaca
agactgaacattagtggatgttccaatttcagtgatactgccttgatttaccttacttgc
cgctgtaaaaacctgaagtgcctgaacttgtgtggatgtgtgaaggctgctactgacaga
gctttgcaggtacttttcgttatatcaagttttgctaaccatgtttctagtatgaacgtc
tacttagtttctataattttgatgcaggttattgctcagaactgtgggcagctgcaatct
ttgaacctaggctggtgtgatgatgttacagataagggagtgaccagcttagcgtcagga
tgtcctgatctcagagctgtagacttgtgtggttgtgttcttataacagatgagagtgtg
gttgctcttgccaacggatgtccgcacctgcgctcattgggcctctactactgccagaac
atcacggaccgtgccatgtactccctcgcaaacagccgtgtgaagagcaagcgtgggagg
tgggatgcggtgaaagacgggctcgcgaacctcaacatcagccagtgcaccgccctgacg
cccccagcggtgcaggctgtctgcgactccttcccggcactgcacacctgctccgagaga
cactccctcatcatcagtggctgcctcagcctcacgtcagtccactgcgcctgcgccctc
cacccacaccgtgccgggagagcgctgatggccaaccatgcgtactaa
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