Miscanthus floridulus: 136517440
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Entry
136517440 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136517440
Transcription machinery [BR:
mflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
136517440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
136517440
NCBI-ProteinID:
XP_066367094
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Position
17:106355768..106358678
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AA seq
585 aa
AA seq
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MGFQMIHGRPCASCCPSSSSSSSSSWMMQALPPKQSHHPLNGGKPIFSESLAALAMHLLL
KRRRDRSSRDIASSAGVLQITENKSAAANLTKHKVSAERKLLDDALDRTEQYESWMGEET
SFWMDRDNTNSNLQYGLLMQNLQELETSLAGKDLKMLENDILAHIEQLGALRSLNASMSM
GATLLDTLTHVSLPHDQSDSSLLDHQIIRFDPETPLDEEQEGSEVVIVRSGKSQERKLKR
VRASEKGTRISVKVNPRRPKKSRKASSSQFISEWKSHPGRRRTIVREQSALLATIKECAS
LEKIREKMVKEGQEVSYHRWAEAAGVDEAELMSRLQAGYCCRERLLVTTEWLVRCIARSY
TGMGTALDDLLQAGKMGVLDGAEKFDTRKGCRFSTYVKYWIRKGMLALLAENSGVTLLPA
RMESIMRKVKEARRGIRYSQGRNPSDSEIAAAVGVSVANVRLARKCSRRPVSLYSEIGIG
QHAKFAEVIPDEATASAEAPDEAALFRGQLRERLLLVLGRLPAREGHVLRLRHGLEDGRC
RSLEEIGGMYRVSKEWIRKIEKSAMARLRDDDDVRRDLHDFVCRF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggggttccagatgatccatggcaggccctgcgcctcttgctgcccgtcgtcctcgtcg
tcgtcctcctcctcgtggatgatgcaggccctgcccccaaagcagtctcaccatccattg
aatggagggaagccaattttctctgaatcccttgcagcactggccatgcatctcctgcta
aaacgtcgcagagaccgtagcagcagggacattgcgtcttcagccggcgtgctccaaatc
acagagaacaaatcagctgcggccaacttaacaaaacacaaggtgagtgcagaaaggaag
ctccttgacgacgctcttgacagaactgaacagtatgagagctggatgggtgaagagaca
tcgttctggatggacagggataacacgaacagcaatttgcagtacggcctgctaatgcag
aaccttcaggaattggagacaagtttggctggtaaagacttgaagatgctggaaaacgac
atccttgcacacatcgagcagcttggagctctgagatcgttgaatgcgtctatgtccatg
ggcgctaccctgctagacaccttaacacatgtctcattgccacatgatcaatcagacagc
tctctgcttgaccaccaaatcatcaggtttgatccagagactcctctggatgaggagcaa
gaaggtagcgaagtagtcatcgtccggagtggcaaaagtcaagagaggaagctgaagaga
gtgagagcgtcagagaaaggaaccaggatctcagtgaaagtgaatccacgaagacccaag
aaatcacggaaggcgagtagcagccagtttatatccgagtggaaaagtcatccaggccga
agaaggaccattgtgcgtgagcaatcagcactgctagcgaccatcaaggaatgtgcaagc
cttgagaagataagggagaagatggtgaaggaagggcaggaggtgagctaccacaggtgg
gcagaggctgctggtgtggacgaggcagagctgatgagcagactgcaggcaggttactgc
tgccgggagaggctgctggtgaccaccgagtggctggtcaggtgcatcgcaagatcatac
accggcatggggacggccttggacgatctgcttcaggctgggaagatgggcgttcttgac
ggcgcggagaagttcgacacccgaaaggggtgcaggttctccacgtacgtcaagtactgg
atcaggaaagggatgctcgctctcctcgctgaaaactcaggagtcaccctgctgcctgca
agaatggagagcatcatgcgcaaggtgaaggaggcgcggcgcgggatccggtacagccag
ggcaggaacccgtcggactccgagatcgccgcggccgtcggcgtgtcggtcgccaacgtg
aggctggcgcgcaagtgctcccgcaggcccgtctcgctctactcggagatcgggatcggg
cagcacgccaagttcgcggaggtgatcccggacgaggcgacggcgtccgcggaggcgccc
gacgaggcggcgctgttccggggccagctgagggagcggctgctgctggtgctgggcagg
ctgcccgcacgggagggacacgtgctgaggctgcgccacgggctggaggacggccggtgc
aggtcgctggaggagatcggcggcatgtaccgcgtgtccaaggagtggatcaggaagatc
gagaagtccgccatggccaggctcagggacgacgacgacgtgcgtcgcgacctccacgac
ttcgtctgccgcttctga
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