Miscanthus floridulus: 136517627
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Entry
136517627 CDS
T10264
Name
(RefSeq) beta-hexosaminidase 1-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00511
Other glycan degradation
mflo00513
Various types of N-glycan biosynthesis
mflo00520
Amino sugar and nucleotide sugar metabolism
mflo00531
Glycosaminoglycan degradation
mflo00600
Sphingolipid metabolism
mflo00603
Glycosphingolipid biosynthesis - globo and isoglobo series
mflo00604
Glycosphingolipid biosynthesis - ganglio series
mflo01100
Metabolic pathways
mflo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
136517627
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
136517627
00513 Various types of N-glycan biosynthesis
136517627
00531 Glycosaminoglycan degradation
136517627
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
136517627
00604 Glycosphingolipid biosynthesis - ganglio series
136517627
00511 Other glycan degradation
136517627
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
136517627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136517627
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
136517627
Chaperones and folding catalysts [BR:
mflo03110
]
Intramolecular chaperones
Others
136517627
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
136517627
NCBI-ProteinID:
XP_066367348
LinkDB
All DBs
Position
17:complement(10834427..10846825)
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AA seq
543 aa
AA seq
DB search
MPPNLPAYLLSALLLAGAAAGARRHASPAANASTAGEPVYLWPLPKSVSSGSRTLTVDPD
LALDPQGPGGRSPALAEAFQRYRGLVFAPWAHAARPRGARYDVTRLTIVVNSANDTLALG
VDESYAIYVGAAGGVNSIVGGAIIEANTIYGAIRGLETFSQLCVFNYDTKNVEVRNAPWH
IQDEPRFAFRGLLLDTSRHYLPVDVIKQVIDSMSFAKLNVLHWHIIDEQSFPLEVPTYPN
LWKGSYSKWERYTVEDAHDIVNYAKKRGINVMAEIDVPGHAKSWGNGYPKLWPSPNCTEP
LDVSSNFTFEVISGILSDMRKIFPFGLFHLGGDEVYTGCWNTTPHVRQWLNEHNMTTKDA
YKYFVLKAQELAIKLNWIPVNWEETFNSFQENLNPLTVVHNWLGPGVCPKVVAKGFRCIM
SNQGVWYLDHLDVPWEDVYSGEPLDGISDKDQQKLVLGGEVCMWGETADTSDVLQTIWPR
AAAAAERLWSQLETITAQDVETTVLSRLHYFRCLLNHRGIAAAPVTNYYARRPPIGPGSC
FVQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaacctccccgcttacctcctctccgccctcctcctcgccggcgccgccgcc
ggcgcgcggcgccacgcgtcgccggccgcgaacgcgtccaccgctggagagcccgtctac
ctctggccgctgcccaagagcgtctcgtccgggtcccggaccctgacggtggacccggac
ctcgcgctcgacccgcagggccccggcggccgctccccggccttggcggaggcgttccag
cggtaccggggcctcgtgttcgcgccgtgggcgcacgccgcgcgcccgcgcggggcacgg
tacgacgtcaccaggctcaccatcgtcgtcaactccgccaacgacacgttggcgctgggg
gtggatgagagctacgctatctacgtgggggcggcgggcggcgtcaattccatcgtcgga
ggagcaatcattgaggcaaacacaatatatggagctattcgtggactggagacattcagt
caactttgtgttttcaactatgataccaaaaatgttgaagtgcggaatgccccatggcat
attcaagatgagccccgctttgcttttcgtgggctgctcctagacacctcacggcattat
cttccagtcgatgttattaagcaagtgatcgactctatgtcgtttgctaagctgaacgtt
cttcattggcatatcatcgatgagcaatcctttccattggaggtgccaacatatccaaac
ctttggaaaggttcatactccaaatgggagcgctacaccgtggaagatgcacatgatatt
gtcaactacgctaagaaaagaggtatcaatgtcatggcagaaattgacgtgcctggtcat
gcaaaatcatggggaaatggatacccaaagctctggccttctcccaattgtacagagcca
ttagatgtctctagtaatttcacgtttgaagtaatttctggaattttgtctgatatgagg
aaaatctttccattcgggctgtttcacttgggtggtgatgaagtatatacagggtgctgg
aacacaacacctcatgtgaggcagtggcttaatgagcacaacatgactacaaaggatgct
tacaaatactttgttctgaaggcccaagagttggcaattaagctaaactggattcctgtg
aattgggaagaaaccttcaattcattccaagaaaatctcaatcctctgacagtggtgcac
aattggctggggcctggagtctgccctaaggttgtggcaaagggtttcagatgtataatg
agcaatcaaggtgtctggtaccttgatcatcttgatgttccctgggaagatgtatacagt
ggcgagccactcgatgggatcagtgacaaagaccagcaaaagctagtacttggtggggaa
gtttgcatgtggggtgagacagcagacacctccgatgttctacaaacaatatggccccga
gcagctgctgcagcagagcgtctgtggagtcaattggagaccataactgcccaagacgta
gaaacaaccgtcctgtcacggctacactatttcagatgcctgctgaatcaccgtggcatt
gctgcggctccagtcacaaactactatgctcggaggcctccaatcggcccaggttcatgc
tttgttcagtaa
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