KEGG   Miscanthus floridulus: 136518024
Entry
136518024         CDS       T10264                                 
Name
(RefSeq) cleavage stimulation factor subunit 50-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
mflo  Miscanthus floridulus
Pathway
mflo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    136518024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136518024
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     136518024
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML NBCH_WD40 WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Cytochrom_D1 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_NOL10_N Ge1_WD40 RMC1_N Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR41
Other DBs
NCBI-GeneID: 136518024
NCBI-ProteinID: XP_066367773
LinkDB
Position
2:complement(15830867..15836276)
AA seq 424 aa
MNEAVQEVKLLRQVNALIVAHLRSQNLGQAAAAVAAATMTPISAAESVPANQLLRLVAKG
LAAERGGGAAASAFDSAGFGGVVQPLGSSAMDFSMQDVKGSSKSFPKHEVKHVSDHKSAA
RCAKFSPDGKYFATGSADTSIKFFEVAKIKQTMVGDSKDGPARPVIRTFYDHTQAINGLD
FHPESPILISAAKDNTIKFFDFSKTNARKAFRVIQDTHNVRSVCFHPCGDYLLAGTDHPV
AHLYDINTFTCYLSANAQDSSSPINQVRYSCTGSLYVTASKDGSLRIWDGVSAECVRPIV
GAHGSAEATSAIFTKDERYVLSCGKDSCVKLWEVGTGRLVKQYEGAIRRQFRCQAVFNET
EEYVLSVDEQNNEVVVWDALTAEKVARLPSGSTGAPRWLDHSPVEPVFVICGNDRSIRFW
KQTV
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgaacgaggcggtgcaggaggtgaagctgctgcggcaggtgaacgcgctcatcgtggcg
cacctccgtagccagaacctcgggcaggccgcagcagccgtcgccgccgccaccatgacc
cccatctccgccgcggaatccgtccccgccaatcaactcctacgtctcgtggccaagggc
ctcgcggcggagcgcggaggaggagccgccgcttccgcattcgactctgccgggttcggt
ggggtggtgcagccgctcggctccagtgccatggatttcagtatgcaggatgtcaagggc
tcatccaagagcttccccaagcacgaggtgaagcatgtctctgaccataagagcgctgcc
cggtgcgcgaaatttagtcctgatggaaagtattttgcaactgggagtgctgatacgtcc
attaagttttttgaggttgctaaaattaagcagactatggtaggggactccaaagatggt
cctgccaggcctgtgattcgcacattttatgatcacacacaggccatcaatggtctggat
tttcatcctgagagtccaatactgatatcagctgcaaaagacaatacaataaaattcttt
gatttctcaaaaaccaatgcgaggaaagcgttcagagttattcaggatactcataatgtt
agatctgtatgttttcatccttgtggggattaccttttagcagggactgatcacccagtt
gctcatttatatgatataaatacttttacatgctacttatcagcaaatgcacaggattct
agttctcccattaaccaggtacgctactcttgtactgggagcttgtatgttactgcttct
aaagatggttctttgcgcatttgggatggagtatctgctgaatgtgttcgacctattgtt
ggagcacatggatccgcagaagctactagcgcaattttcaccaaagatgagaggtacgtc
ctatcttgtgggaaagattcttgtgtcaagttatgggaagttggcactggacgacttgtg
aagcaatatgaaggagccattcgcagacaatttcgttgtcaggctgtcttcaatgaaacc
gaggaatacgtgctatcagttgatgaacaaaacaatgaggttgtcgtctgggatgcactt
actgctgaaaaggttgcaagattgccctctggcagcactggtgctcctagatggctcgac
cactccccagttgagccagtttttgttatttgtggaaacgatagatcgatcagattctgg
aaacaaaccgtataa

DBGET integrated database retrieval system