KEGG   Miscanthus floridulus: 136518444
Entry
136518444         CDS       T10264                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
mflo  Miscanthus floridulus
Pathway
mflo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    136518444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mflo04121]
    136518444
   03036 Chromosome and associated proteins [BR:mflo03036]
    136518444
Enzymes [BR:mflo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     136518444
Ubiquitin system [BR:mflo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    136518444
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     136518444
    Noncanonical PRC1 (PRC1.1)
     136518444
    Noncanonical PRC1 (PRC1.3/1.5)
     136518444
    Noncanonical PRC1 (PRC1.6)
     136518444
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-UDP zf-rbx1 zf-RING_6 zf-Nse ZNF512_C2HC zf-C3HC4_5 zf-RING_11
Other DBs
NCBI-GeneID: 136518444
NCBI-ProteinID: XP_066368229
LinkDB
Position
1:51075482..51081902
AA seq 469 aa
MPAQKRPPPPPSPSPSAAAGAGSPPPASPPPPPTAEPAEKKPKLEENGSAVAEANGNAND
SGAKAAAAAAAESSESESEDADAAKQEFVPVKLLDVRKEVQCPICLGIIRKTRTVMECLH
RFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFNE
EENDRNKQIQASIAEAFRKQSEVIGRKSTAKATAAAFVRRSRRNIRPNGQNTYFRGRGRA
SSDDVALACSEDEEDGNGENCNKESSSAEESSPEKKQKRLPKWPTPRSSPARGACNDEAA
SDEKDDVGISRENFSTSPLRAWGKNGTRSQTRHSSFSGSNGRMVKGGRMIKLVECLRNSD
DNDSERDVHLCLLPLDGQTAPNLEKSYLCCGPTLSIKQLCQFVASQTSHKDEEVEMYALK
PSYSNPVSTNPSGLDKARLAGEERLSDLRSSFTFPNGVLELVYAIKVAN
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgcccgcccagaagcgcccgcccccgccaccctcgccctccccctccgcggccgcgggc
gccggctcgccccctcccgcgtctccgccgccgccgccgacggccgagcccgcggagaag
aagcccaagctggaggagaacggcagcgccgtcgccgaagccaacggcaacgccaacgat
tccggcgcgaaggcggcggcggcggcggcggcggagtcgtcggagtctgagtcggaggac
gcggacgccgcaaaacaggagtttgtaccagtaaaattgctggatgtacgcaaagaagtg
cagtgtcccatatgcttaggcatcatccggaagactagaacagttatggaatgcctacac
cggttctgtagggaatgcattgacaaatccatgcgacttgggaacaacgagtgcccagcg
tgccgcacacactgtgcgagtcggcgttctttgagagatgatccgaactacgatgccttg
attgcagctctatatccagatattgacaaatatgaagaagaggagctagcgttcaacgaa
gaggagaatgaccgcaataagcagattcaagcatccattgctgaggcttttcggaaacaa
tcagaagttattgggcggaagtctaccgccaaagctactgctgctgcatttgtaagaaga
tcacgccgtaacattcggcctaatgggcagaatacctattttcgtggccgaggtagagcc
agttccgatgatgttgctctggcctgttctgaagatgaagaggatggaaacggtgaaaac
tgtaacaaagagtcctcatctgctgaggagagttccccagagaaaaagcagaaacgactg
ccaaaatggccaacaccacgttcttcacctgcccgaggagcatgcaatgacgaggccgct
tctgatgaaaaggatgatgtaggaatctccagggaaaattttagcacatctcctctacga
gcatggggaaagaatggcactcgcagtcagactcgccacagtagcttcagtggttcaaat
ggtaggatggtcaagggtgggcgcatgatcaagttggttgagtgcctgcgaaattctgac
gacaatgacagcgagcgtgacgtacatctttgtctgcttccacttgatggacaaacggca
ccaaatctggagaagtcatatctgtgctgcggcccaactctctccatcaaacaactttgt
cagtttgtcgccagtcagacatcacacaaagatgaagaagttgagatgtatgcgctgaag
ccttcttatagcaatcctgtcagcactaatccatctggtcttgacaaagcaaggctcgca
ggggaggaacgcctttcagacttgcgctcctcgttcacatttcctaatggggttctggag
ctggtgtatgccataaaagtggcgaactag

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