Miscanthus floridulus: 136519068
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Entry
136519068 CDS
T10264
Name
(RefSeq) sm-like protein LSM8 isoform X1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136519068
09123 Folding, sorting and degradation
03018 RNA degradation
136519068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136519068
03041 Spliceosome [BR:
mflo03041
]
136519068
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136519068
mRNA degradation factors
5'-3' decay
Lsm complex
136519068
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136519068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
RVT_2
Motif
Other DBs
NCBI-GeneID:
136519068
NCBI-ProteinID:
XP_066368832
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Position
17:complement(60165420..60186765)
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AA seq
106 aa
AA seq
DB search
MASGGLALEPLVDQVISVITNDGRNIVGTLRGFDQATNIIRDESHERVYSRKEGVQQLVL
GLYIIRGDNISVVGEVDEELDSRLDMSKLRAHPLKPVIHLGPLRRD
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcggtctggcactcgagccgctcgtcgaccaggtcatctccgtcatcacc
aacgatggccgcaacatcgtgggtacactcaggggattcgatcaggccaccaacattatc
cgcgatgagtcccacgagagggtctactctagaaaggagggagtccaacaacttgtactt
ggtctgtacattatcaggggtgacaacataagcgttgtgggcgaggtcgacgaagagctg
gattcaagattggatatgtcgaagctaagggcgcacccactgaagcctgttatccactta
ggtccgctgcggcgagattag
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