Miscanthus floridulus: 136519079
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Entry
136519079 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136519079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136519079
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136519079
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136519079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
136519079
NCBI-ProteinID:
XP_066368835
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Position
17:21057407..21060700
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AA seq
345 aa
AA seq
DB search
MADSASKDRAAKRSGRGGPGGGDEPKQKRAGSLGVDAGGGGGSSAPATAPASASRAHPGS
AAASLVDVTVEDADALDCGVCFLPLKPPIFQCNVGHVVCSLCRDKLQATGKCHVCGVATG
NYRRCHAMEQLVESIRVPCLYAAHGCALRAAYYDQESHRLVCEHAPCHCPGEACSFVGST
AALLDHVSTAHKWPCITTVKTNDGGYFNVHLHDGFNLILADCSIGNKNKGSTSSVQCLLL
LTVERQQLARFISVHWIDPHAAGTSGSQGPTSKEMECQLWYSANFELIRCSTWLIHHYQS
WKFRVARTNLSNGLPKPDDCFQVVVPNSVVGDGTGIQIGVRIDIN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcggcatcaaaagatcgtgcggcgaagcggtcaggaaggggaggtccggga
gggggagatgaaccgaagcaaaagcgagcaggatccctcggtgtcgacgccggcggcggc
ggaggatcctctgctcctgcaacggcgccggcgtcagcgtcgcgcgctcacccagggagc
gctgcggcgtcgttggtggacgtcacggtggaggacgccgacgccctcgactgcggcgtg
tgcttcctcccactgaagcccccaatcttccagtgcaacgtggggcatgttgtctgttca
ctgtgccgtgataagctccaggccacgggcaagtgccatgtgtgtggggtcgccaccggc
aactaccgcaggtgccatgccatggagcaattggtggaatccatccgcgtcccatgtttg
tacgctgcccatggttgtgccttgagggcggcctactatgatcaagaaagccaccgcttg
gtgtgcgagcacgcgccatgccactgtcctggtgaggcttgcagctttgtgggctccaca
gctgcgctcctggaccatgtcagcacggcacacaaatggccatgcatcaccacagtcaaa
accaacgatggtggctattttaacgtccatctccatgatggcttcaacctcatcctcgct
gattgctccatcggaaacaagaacaaaggttccacttccagcgtccagtgccttctccta
ctgactgtggagcggcaacagcttgcccgcttcatctctgtgcactggattgaccctcac
gctgccggcaccagtggtagtcagggaccaacctcaaaggaaatggaatgccagctttgg
tacagtgcgaactttgaacttatccgctgcagtacttggttaatccaccattaccagtca
tggaagttcagagtagcccgcacaaacctctccaatgggctgcctaaacctgacgactgc
ttccaggttgtcgtgccaaattcagttgttggagatggtactggtatccagatcggagtt
cgcattgacataaattga
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