Miscanthus floridulus: 136519492
Help
Entry
136519492 CDS
T10264
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136519492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136519492
03036 Chromosome and associated proteins [BR:
mflo03036
]
136519492
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136519492
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136519492
PBAF complex
136519492
GBAF(ncBAF) complex
136519492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
136519492
NCBI-ProteinID:
XP_066368979
LinkDB
All DBs
Position
2:complement(21271822..21277350)
Genome browser
AA seq
902 aa
AA seq
DB search
MEPKPSSAAHGDAPAVEAPRRRGGGGKRKSAGSSSTPSKRQAKERNASFHVPPHLLHSGP
LTRAARQSPHKLAGTLPESGPASLAAATGDGVSGGQAEVDAIRPETEETPASELPLVDEM
FEAVRSRGAGVHVVPTFAGWFSWKEIHSVEKQTLPSFFNGKSEKRTPEVYLAIRNSIMMK
FHANPQLQLESKDLAELSIGETDARQEVLEFLDHWGLINFHPFPPAGHEESKPEESQDNS
NDEKASLIEQLFKFESVQSYMMPLPKKEDVGALPPLPSLFPEPVLIEDVVAAAEPSVEYH
CNSCSVDCSRKRYHCRTQADFDLCCDCYNEGKFDPGMAKTDFILMDSAEVSGASGTSWTD
EETLLLLEGLEIFGGKWAEIAEHVATKTKAQCMLHFLQMQIEDRFHDGEDINQNIPVSTE
QATTEKVIAETSEKMEVEDKVEGRDTADEKASEKTEGNCEETKTEDASIVVNKDTQNSGG
KNSGASPSTEEPKQSSDIVKENSADVDTSGEKLSNVAIDILKSAFEAAGHSPEYEGSFAD
AGNPVMALAAYLAGLVEDDNTTTSFRSSLKAISEVSPALQLASRHCFILEDPPNELKDTC
ASVSKKNTDGDQTKDEDMIQNSVDTEKKEINEKEDKSLSVEKKNNSSTSQNDHQETDIKS
VSHDDCSLVEPKTNNAKESGDSTAIVDKSATDTTKDVDAGNTKQVNDSPSVEVEAPDDSS
LKGKDELNKTEDAVATPATVQEQKHSQTLENGDKEGPNNIESVVVDEEKGSILTANQNDS
ITRLKRAAATAVSAAAVKAKFLGDQEEYQIRRLTALMIEKLFQKIEVKMSLFSEIEQVVL
RTREYTEKTRKKLLMERNAIIAARMGALPSRPNQPGVAGNRLPPGYGNPSVRPPNALPRP
TS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaagccgtcttcggcggcgcatggtgacgcgcccgcggtcgaggccccccgc
cgccgtggcggcggcggcaagcgcaagtcggccgggtcctcgtccacgccgtcgaagcgg
caggccaaggagcggaacgcttccttccacgtgccgccgcatcttctgcacagcgggccg
ctcacccgcgccgcgcgccagtcgccgcacaagctcgcgggcacgttgccggagtcgggg
ccagcgtcgttggcggccgcaactggggacggggtgagcggcgggcaggcggaggttgat
gcgatccggcccgagacggaggagacgccggcctcggagctgccgctggtggacgagatg
tttgaggccgtccgatcccgtggcgccggcgtccatgtggtccctacctttgctggatgg
ttttcatggaaagaaatccactcggttgagaagcagaccttgccttctttttttaatgga
aaatctgagaagcggacacctgaggtatatttggcgattagaaattcgatcatgatgaaa
tttcatgccaatcctcaattgcagctggagtccaaagatctggctgagttgtcaatcggg
gagactgatgctcggcaggaagtcttggaattcttggatcactggggcttgataaatttc
caccctttcccacctgctggacatgaggagagtaagccagaggagagccaagacaattct
aatgatgagaaagcttctttgatcgagcagctgtttaaatttgaatcagttcaatcatat
atgatgcctttaccaaagaaagaagatgtgggagctctgccccctctgcctagcttgttt
cctgaacctgtactcattgaagatgtggttgcagcagctgagccttctgttgagtaccac
tgcaactcctgttcagttgattgctcacggaagcgctatcattgtcggacccaggcagat
tttgacctctgttgtgattgctataatgaagggaagttcgatccaggcatggccaaaacc
gatttcatcctcatggattctgcagaagtttcaggtgctagtggtactagttggactgat
gaggagacattacttcttttagaaggtttggaaatttttggtggaaaatgggctgagatt
gctgaacatgttgctactaagacaaaagcacaatgcatgttgcactttcttcaaatgcaa
attgaagaccgcttccatgatggcgaagatattaatcaaaacattccagtaagtacagag
caagccacaactgagaaagtaattgctgaaacatctgaaaaaatggaagttgaagataaa
gtggaaggaagagatactgcggatgagaaggcctcagagaaaacagagggaaactgtgaa
gaaacaaaaactgaagatgcaagtattgttgtaaataaagatactcagaattcaggtggc
aaaaattcaggtgcatctccaagcactgaagagccaaagcaatcttctgatatagtaaag
gaaaattctgcagatgtagatacttctggtgaaaaactatcaaatgttgctattgatatc
ctaaaatctgcatttgaggctgctggtcacagcccagaatatgaaggttcatttgctgat
gcaggaaatccagttatggcactagcagcatatttagctggtcttgtggaagatgataac
actaccacttcattccgtagttcactaaaagctatatctgaggtgtctcctgcactccaa
ttagcaagtaggcactgttttattcttgaggacccaccaaatgaactcaaagacacttgt
gctagtgtaagtaagaaaaatacagatggtgatcaaacaaaagatgaggatatgattcaa
aattcagttgatactgagaaaaaagagatcaatgagaaagaagataagtctttatctgtg
gaaaagaaaaacaattcatccacgtcacaaaatgaccaccaagaaacagacattaagagc
gtctcacatgatgattgctccttagtggagccgaaaaccaataatgctaaggagtcaggt
gattcaactgctattgtagataagagtgcaaccgacactacaaaagatgttgatgcaggt
aatactaaacaagtgaatgactcaccaagtgttgaggtggaggctcctgatgattcatct
ttaaaaggcaaggatgagctcaataagactgaagatgcagtggcgacaccagctaccgta
caggaacagaaacacagccaaacattggaaaatggcgataaggaaggacctaacaacatt
gaaagtgtagttgtcgacgaagagaagggatctatattgactgccaaccaaaatgattcc
ataactaggctcaaacgagcagcagccactgctgtttcagcagctgctgtgaaagctaag
tttctcggtgatcaggaggaatatcaaattcgaaggctgacagcacttatgattgaaaag
ctgttccaaaaaatagaagtgaagatgtcgttgttttcagagattgagcaggtggtcctt
cgaacaagagagtataccgagaagaccagaaagaagctcctaatggaacgaaatgccatt
attgcagctcggatgggtgcattgccgtctaggccaaaccagcctggtgtagccggaaac
aggttaccgcctggatatggcaacccttctgtaaggcctccaaacgcattgccgcggcct
accagctga
DBGET
integrated database retrieval system
